Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15440 | 46543;46544;46545 | chr2:178620099;178620098;178620097 | chr2:179484826;179484825;179484824 |
N2AB | 13799 | 41620;41621;41622 | chr2:178620099;178620098;178620097 | chr2:179484826;179484825;179484824 |
N2A | 12872 | 38839;38840;38841 | chr2:178620099;178620098;178620097 | chr2:179484826;179484825;179484824 |
N2B | 6375 | 19348;19349;19350 | chr2:178620099;178620098;178620097 | chr2:179484826;179484825;179484824 |
Novex-1 | 6500 | 19723;19724;19725 | chr2:178620099;178620098;178620097 | chr2:179484826;179484825;179484824 |
Novex-2 | 6567 | 19924;19925;19926 | chr2:178620099;178620098;178620097 | chr2:179484826;179484825;179484824 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.121 | N | 0.353 | 0.091 | 0.451504584351 | gnomAD-4.0.0 | 1.60166E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.45858E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5357 | ambiguous | 0.5512 | ambiguous | -0.137 | Destabilizing | 0.983 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/C | 0.8335 | likely_pathogenic | 0.8458 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/D | 0.7487 | likely_pathogenic | 0.7719 | pathogenic | 0.022 | Stabilizing | 0.998 | D | 0.712 | prob.delet. | None | None | None | None | N |
K/E | 0.3143 | likely_benign | 0.3137 | benign | 0.045 | Stabilizing | 0.978 | D | 0.706 | prob.neutral | N | 0.448951255 | None | None | N |
K/F | 0.8995 | likely_pathogenic | 0.9067 | pathogenic | -0.237 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/G | 0.6811 | likely_pathogenic | 0.6971 | pathogenic | -0.384 | Destabilizing | 0.998 | D | 0.668 | neutral | None | None | None | None | N |
K/H | 0.4306 | ambiguous | 0.4755 | ambiguous | -0.776 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/I | 0.5016 | ambiguous | 0.4937 | ambiguous | 0.447 | Stabilizing | 0.999 | D | 0.737 | prob.delet. | N | 0.496696274 | None | None | N |
K/L | 0.6048 | likely_pathogenic | 0.6293 | pathogenic | 0.447 | Stabilizing | 0.995 | D | 0.668 | neutral | None | None | None | None | N |
K/M | 0.383 | ambiguous | 0.372 | ambiguous | 0.334 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/N | 0.5338 | ambiguous | 0.5806 | pathogenic | 0.179 | Stabilizing | 0.997 | D | 0.695 | prob.neutral | N | 0.485199669 | None | None | N |
K/P | 0.913 | likely_pathogenic | 0.9207 | pathogenic | 0.282 | Stabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/Q | 0.1875 | likely_benign | 0.1957 | benign | -0.002 | Destabilizing | 0.994 | D | 0.697 | prob.neutral | N | 0.481867391 | None | None | N |
K/R | 0.098 | likely_benign | 0.0948 | benign | -0.157 | Destabilizing | 0.121 | N | 0.353 | neutral | N | 0.443752706 | None | None | N |
K/S | 0.5706 | likely_pathogenic | 0.5985 | pathogenic | -0.336 | Destabilizing | 0.992 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/T | 0.24 | likely_benign | 0.2489 | benign | -0.15 | Destabilizing | 0.997 | D | 0.681 | prob.neutral | N | 0.499471108 | None | None | N |
K/V | 0.4702 | ambiguous | 0.4564 | ambiguous | 0.282 | Stabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/W | 0.874 | likely_pathogenic | 0.8809 | pathogenic | -0.204 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/Y | 0.7859 | likely_pathogenic | 0.7959 | pathogenic | 0.128 | Stabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.