Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15445 | 46558;46559;46560 | chr2:178620084;178620083;178620082 | chr2:179484811;179484810;179484809 |
N2AB | 13804 | 41635;41636;41637 | chr2:178620084;178620083;178620082 | chr2:179484811;179484810;179484809 |
N2A | 12877 | 38854;38855;38856 | chr2:178620084;178620083;178620082 | chr2:179484811;179484810;179484809 |
N2B | 6380 | 19363;19364;19365 | chr2:178620084;178620083;178620082 | chr2:179484811;179484810;179484809 |
Novex-1 | 6505 | 19738;19739;19740 | chr2:178620084;178620083;178620082 | chr2:179484811;179484810;179484809 |
Novex-2 | 6572 | 19939;19940;19941 | chr2:178620084;178620083;178620082 | chr2:179484811;179484810;179484809 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.896 | N | 0.729 | 0.292 | 0.349429436713 | gnomAD-4.0.0 | 1.59675E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86651E-06 | 0 | 0 |
H/Y | rs1295193843 | 0.389 | 0.004 | N | 0.408 | 0.177 | 0.273938319068 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.3E-05 | None | 0 | 0 | 0 |
H/Y | rs1295193843 | 0.389 | 0.004 | N | 0.408 | 0.177 | 0.273938319068 | gnomAD-4.0.0 | 1.59686E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4415E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7297 | likely_pathogenic | 0.8539 | pathogenic | -1.663 | Destabilizing | 0.4 | N | 0.745 | deleterious | None | None | None | None | N |
H/C | 0.2157 | likely_benign | 0.3165 | benign | -0.911 | Destabilizing | 0.002 | N | 0.623 | neutral | None | None | None | None | N |
H/D | 0.8997 | likely_pathogenic | 0.9479 | pathogenic | -1.606 | Destabilizing | 0.883 | D | 0.732 | prob.delet. | D | 0.534028764 | None | None | N |
H/E | 0.874 | likely_pathogenic | 0.9232 | pathogenic | -1.417 | Destabilizing | 0.766 | D | 0.694 | prob.neutral | None | None | None | None | N |
H/F | 0.4673 | ambiguous | 0.5999 | pathogenic | 0.262 | Stabilizing | 0.447 | N | 0.716 | prob.delet. | None | None | None | None | N |
H/G | 0.8346 | likely_pathogenic | 0.9187 | pathogenic | -2.077 | Highly Destabilizing | 0.766 | D | 0.742 | deleterious | None | None | None | None | N |
H/I | 0.7051 | likely_pathogenic | 0.819 | pathogenic | -0.443 | Destabilizing | 0.617 | D | 0.783 | deleterious | None | None | None | None | N |
H/K | 0.8302 | likely_pathogenic | 0.865 | pathogenic | -1.091 | Destabilizing | 0.617 | D | 0.72 | prob.delet. | None | None | None | None | N |
H/L | 0.3662 | ambiguous | 0.4621 | ambiguous | -0.443 | Destabilizing | 0.379 | N | 0.745 | deleterious | N | 0.508453055 | None | None | N |
H/M | 0.7831 | likely_pathogenic | 0.873 | pathogenic | -0.687 | Destabilizing | 0.972 | D | 0.737 | prob.delet. | None | None | None | None | N |
H/N | 0.361 | ambiguous | 0.5091 | ambiguous | -1.679 | Destabilizing | 0.712 | D | 0.69 | prob.neutral | D | 0.534528706 | None | None | N |
H/P | 0.9246 | likely_pathogenic | 0.9512 | pathogenic | -0.84 | Destabilizing | 0.963 | D | 0.755 | deleterious | D | 0.591865933 | None | None | N |
H/Q | 0.5349 | ambiguous | 0.6491 | pathogenic | -1.267 | Destabilizing | 0.896 | D | 0.735 | prob.delet. | N | 0.51014321 | None | None | N |
H/R | 0.5025 | ambiguous | 0.507 | ambiguous | -1.342 | Destabilizing | 0.896 | D | 0.729 | prob.delet. | N | 0.485783339 | None | None | N |
H/S | 0.5602 | ambiguous | 0.73 | pathogenic | -1.803 | Destabilizing | 0.617 | D | 0.727 | prob.delet. | None | None | None | None | N |
H/T | 0.6784 | likely_pathogenic | 0.8475 | pathogenic | -1.501 | Destabilizing | 0.766 | D | 0.739 | prob.delet. | None | None | None | None | N |
H/V | 0.5958 | likely_pathogenic | 0.7395 | pathogenic | -0.84 | Destabilizing | 0.617 | D | 0.765 | deleterious | None | None | None | None | N |
H/W | 0.5761 | likely_pathogenic | 0.6473 | pathogenic | 0.786 | Stabilizing | 0.977 | D | 0.732 | prob.delet. | None | None | None | None | N |
H/Y | 0.146 | likely_benign | 0.2021 | benign | 0.611 | Stabilizing | 0.004 | N | 0.408 | neutral | N | 0.503234198 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.