Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15451 | 46576;46577;46578 | chr2:178620066;178620065;178620064 | chr2:179484793;179484792;179484791 |
N2AB | 13810 | 41653;41654;41655 | chr2:178620066;178620065;178620064 | chr2:179484793;179484792;179484791 |
N2A | 12883 | 38872;38873;38874 | chr2:178620066;178620065;178620064 | chr2:179484793;179484792;179484791 |
N2B | 6386 | 19381;19382;19383 | chr2:178620066;178620065;178620064 | chr2:179484793;179484792;179484791 |
Novex-1 | 6511 | 19756;19757;19758 | chr2:178620066;178620065;178620064 | chr2:179484793;179484792;179484791 |
Novex-2 | 6578 | 19957;19958;19959 | chr2:178620066;178620065;178620064 | chr2:179484793;179484792;179484791 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs1576541228 | None | 0.999 | D | 0.675 | 0.665 | 0.891608219599 | gnomAD-4.0.0 | 4.10974E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.40103E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4453 | ambiguous | 0.5316 | ambiguous | -0.825 | Destabilizing | 0.978 | D | 0.491 | neutral | D | 0.538815869 | None | None | N |
D/C | 0.9121 | likely_pathogenic | 0.9396 | pathogenic | -0.377 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
D/E | 0.2561 | likely_benign | 0.2938 | benign | -0.813 | Destabilizing | 0.198 | N | 0.249 | neutral | N | 0.488750718 | None | None | N |
D/F | 0.84 | likely_pathogenic | 0.8814 | pathogenic | -0.641 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
D/G | 0.3684 | ambiguous | 0.4201 | ambiguous | -1.135 | Destabilizing | 0.989 | D | 0.442 | neutral | D | 0.53513187 | None | None | N |
D/H | 0.665 | likely_pathogenic | 0.7416 | pathogenic | -0.925 | Destabilizing | 1.0 | D | 0.489 | neutral | D | 0.547341546 | None | None | N |
D/I | 0.8228 | likely_pathogenic | 0.8772 | pathogenic | -0.013 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
D/K | 0.7623 | likely_pathogenic | 0.8114 | pathogenic | -0.64 | Destabilizing | 0.983 | D | 0.421 | neutral | None | None | None | None | N |
D/L | 0.783 | likely_pathogenic | 0.8343 | pathogenic | -0.013 | Destabilizing | 0.998 | D | 0.675 | prob.neutral | None | None | None | None | N |
D/M | 0.8882 | likely_pathogenic | 0.9247 | pathogenic | 0.53 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
D/N | 0.1968 | likely_benign | 0.224 | benign | -0.996 | Destabilizing | 0.989 | D | 0.423 | neutral | N | 0.50816475 | None | None | N |
D/P | 0.9747 | likely_pathogenic | 0.9856 | pathogenic | -0.26 | Destabilizing | 0.999 | D | 0.483 | neutral | None | None | None | None | N |
D/Q | 0.6328 | likely_pathogenic | 0.7013 | pathogenic | -0.893 | Destabilizing | 0.995 | D | 0.406 | neutral | None | None | None | None | N |
D/R | 0.7608 | likely_pathogenic | 0.8207 | pathogenic | -0.47 | Destabilizing | 0.995 | D | 0.6 | neutral | None | None | None | None | N |
D/S | 0.3413 | ambiguous | 0.4192 | ambiguous | -1.226 | Destabilizing | 0.983 | D | 0.395 | neutral | None | None | None | None | N |
D/T | 0.6297 | likely_pathogenic | 0.7146 | pathogenic | -0.978 | Destabilizing | 0.998 | D | 0.436 | neutral | None | None | None | None | N |
D/V | 0.6251 | likely_pathogenic | 0.716 | pathogenic | -0.26 | Destabilizing | 0.997 | D | 0.67 | neutral | D | 0.544169316 | None | None | N |
D/W | 0.9598 | likely_pathogenic | 0.9728 | pathogenic | -0.484 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
D/Y | 0.4266 | ambiguous | 0.4348 | ambiguous | -0.435 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | D | 0.662016656 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.