Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15459 | 46600;46601;46602 | chr2:178620042;178620041;178620040 | chr2:179484769;179484768;179484767 |
N2AB | 13818 | 41677;41678;41679 | chr2:178620042;178620041;178620040 | chr2:179484769;179484768;179484767 |
N2A | 12891 | 38896;38897;38898 | chr2:178620042;178620041;178620040 | chr2:179484769;179484768;179484767 |
N2B | 6394 | 19405;19406;19407 | chr2:178620042;178620041;178620040 | chr2:179484769;179484768;179484767 |
Novex-1 | 6519 | 19780;19781;19782 | chr2:178620042;178620041;178620040 | chr2:179484769;179484768;179484767 |
Novex-2 | 6586 | 19981;19982;19983 | chr2:178620042;178620041;178620040 | chr2:179484769;179484768;179484767 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs752596345 | -0.824 | 1.0 | N | 0.617 | 0.388 | 0.345405024496 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.98E-06 | 0 |
E/Q | rs752596345 | -0.824 | 1.0 | N | 0.617 | 0.388 | 0.345405024496 | gnomAD-4.0.0 | 1.59515E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86518E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6783 | likely_pathogenic | 0.6742 | pathogenic | -0.877 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | N | 0.510874668 | None | None | N |
E/C | 0.9887 | likely_pathogenic | 0.9897 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/D | 0.4823 | ambiguous | 0.513 | ambiguous | -1.206 | Destabilizing | 0.999 | D | 0.564 | neutral | N | 0.511147514 | None | None | N |
E/F | 0.9649 | likely_pathogenic | 0.9676 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/G | 0.8281 | likely_pathogenic | 0.817 | pathogenic | -1.237 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | D | 0.682813392 | None | None | N |
E/H | 0.9435 | likely_pathogenic | 0.9469 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/I | 0.7313 | likely_pathogenic | 0.7623 | pathogenic | 0.104 | Stabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
E/K | 0.8196 | likely_pathogenic | 0.8037 | pathogenic | -0.813 | Destabilizing | 0.999 | D | 0.625 | neutral | N | 0.505009886 | None | None | N |
E/L | 0.8491 | likely_pathogenic | 0.8615 | pathogenic | 0.104 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
E/M | 0.8644 | likely_pathogenic | 0.8825 | pathogenic | 0.593 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/N | 0.8447 | likely_pathogenic | 0.8436 | pathogenic | -1.149 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/P | 0.9464 | likely_pathogenic | 0.932 | pathogenic | -0.201 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/Q | 0.5743 | likely_pathogenic | 0.5719 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.617 | neutral | N | 0.511664359 | None | None | N |
E/R | 0.8762 | likely_pathogenic | 0.8636 | pathogenic | -0.619 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/S | 0.7216 | likely_pathogenic | 0.7271 | pathogenic | -1.495 | Destabilizing | 0.999 | D | 0.61 | neutral | None | None | None | None | N |
E/T | 0.6842 | likely_pathogenic | 0.7097 | pathogenic | -1.201 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/V | 0.586 | likely_pathogenic | 0.6261 | pathogenic | -0.201 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.511986766 | None | None | N |
E/W | 0.9913 | likely_pathogenic | 0.991 | pathogenic | -0.362 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/Y | 0.9525 | likely_pathogenic | 0.9572 | pathogenic | -0.299 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.