Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1546 | 4861;4862;4863 | chr2:178777429;178777428;178777427 | chr2:179642156;179642155;179642154 |
N2AB | 1546 | 4861;4862;4863 | chr2:178777429;178777428;178777427 | chr2:179642156;179642155;179642154 |
N2A | 1546 | 4861;4862;4863 | chr2:178777429;178777428;178777427 | chr2:179642156;179642155;179642154 |
N2B | 1500 | 4723;4724;4725 | chr2:178777429;178777428;178777427 | chr2:179642156;179642155;179642154 |
Novex-1 | 1500 | 4723;4724;4725 | chr2:178777429;178777428;178777427 | chr2:179642156;179642155;179642154 |
Novex-2 | 1500 | 4723;4724;4725 | chr2:178777429;178777428;178777427 | chr2:179642156;179642155;179642154 |
Novex-3 | 1546 | 4861;4862;4863 | chr2:178777429;178777428;178777427 | chr2:179642156;179642155;179642154 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.64 | N | 0.531 | 0.31 | 0.394990421082 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0958 | likely_benign | 0.0965 | benign | -0.86 | Destabilizing | 0.64 | D | 0.531 | neutral | N | 0.513531673 | None | None | N |
T/C | 0.4975 | ambiguous | 0.5261 | ambiguous | -0.575 | Destabilizing | 0.999 | D | 0.587 | neutral | None | None | None | None | N |
T/D | 0.3104 | likely_benign | 0.3105 | benign | -0.097 | Destabilizing | 0.976 | D | 0.537 | neutral | None | None | None | None | N |
T/E | 0.2525 | likely_benign | 0.2584 | benign | -0.093 | Destabilizing | 0.976 | D | 0.545 | neutral | None | None | None | None | N |
T/F | 0.2572 | likely_benign | 0.2666 | benign | -0.891 | Destabilizing | 0.988 | D | 0.673 | neutral | None | None | None | None | N |
T/G | 0.3212 | likely_benign | 0.3421 | ambiguous | -1.119 | Destabilizing | 0.851 | D | 0.645 | neutral | None | None | None | None | N |
T/H | 0.1692 | likely_benign | 0.1745 | benign | -1.34 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/I | 0.2038 | likely_benign | 0.2091 | benign | -0.262 | Destabilizing | 0.211 | N | 0.328 | neutral | N | 0.515612042 | None | None | N |
T/K | 0.1862 | likely_benign | 0.1838 | benign | -0.704 | Destabilizing | 0.976 | D | 0.542 | neutral | None | None | None | None | N |
T/L | 0.1186 | likely_benign | 0.122 | benign | -0.262 | Destabilizing | 0.851 | D | 0.573 | neutral | None | None | None | None | N |
T/M | 0.0963 | likely_benign | 0.1005 | benign | -0.013 | Destabilizing | 0.997 | D | 0.577 | neutral | None | None | None | None | N |
T/N | 0.0956 | likely_benign | 0.0955 | benign | -0.645 | Destabilizing | 0.968 | D | 0.487 | neutral | N | 0.49710086 | None | None | N |
T/P | 0.5488 | ambiguous | 0.548 | ambiguous | -0.429 | Destabilizing | 0.984 | D | 0.568 | neutral | D | 0.705840749 | None | None | N |
T/Q | 0.1897 | likely_benign | 0.1954 | benign | -0.815 | Destabilizing | 0.988 | D | 0.579 | neutral | None | None | None | None | N |
T/R | 0.1593 | likely_benign | 0.1553 | benign | -0.471 | Destabilizing | 0.976 | D | 0.575 | neutral | None | None | None | None | N |
T/S | 0.1022 | likely_benign | 0.1079 | benign | -0.974 | Destabilizing | 0.103 | N | 0.199 | neutral | N | 0.512264129 | None | None | N |
T/V | 0.1769 | likely_benign | 0.1832 | benign | -0.429 | Destabilizing | 0.851 | D | 0.534 | neutral | None | None | None | None | N |
T/W | 0.5879 | likely_pathogenic | 0.6138 | pathogenic | -0.79 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/Y | 0.2869 | likely_benign | 0.2981 | benign | -0.569 | Destabilizing | 0.996 | D | 0.684 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.