Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15465 | 46618;46619;46620 | chr2:178620024;178620023;178620022 | chr2:179484751;179484750;179484749 |
N2AB | 13824 | 41695;41696;41697 | chr2:178620024;178620023;178620022 | chr2:179484751;179484750;179484749 |
N2A | 12897 | 38914;38915;38916 | chr2:178620024;178620023;178620022 | chr2:179484751;179484750;179484749 |
N2B | 6400 | 19423;19424;19425 | chr2:178620024;178620023;178620022 | chr2:179484751;179484750;179484749 |
Novex-1 | 6525 | 19798;19799;19800 | chr2:178620024;178620023;178620022 | chr2:179484751;179484750;179484749 |
Novex-2 | 6592 | 19999;20000;20001 | chr2:178620024;178620023;178620022 | chr2:179484751;179484750;179484749 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs773523242 | -0.536 | 0.22 | N | 0.597 | 0.311 | 0.33110744837 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/G | rs773523242 | -0.536 | 0.22 | N | 0.597 | 0.311 | 0.33110744837 | gnomAD-4.0.0 | 1.59546E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43538E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2903 | likely_benign | 0.3143 | benign | -0.139 | Destabilizing | 0.22 | N | 0.553 | neutral | N | 0.501281244 | None | None | N |
E/C | 0.9409 | likely_pathogenic | 0.9469 | pathogenic | -0.02 | Destabilizing | 0.968 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/D | 0.0853 | likely_benign | 0.1122 | benign | -0.307 | Destabilizing | None | N | 0.205 | neutral | N | 0.473669972 | None | None | N |
E/F | 0.8817 | likely_pathogenic | 0.9199 | pathogenic | -0.077 | Destabilizing | 0.89 | D | 0.674 | neutral | None | None | None | None | N |
E/G | 0.1807 | likely_benign | 0.1876 | benign | -0.307 | Destabilizing | 0.22 | N | 0.597 | neutral | N | 0.468236864 | None | None | N |
E/H | 0.7372 | likely_pathogenic | 0.7932 | pathogenic | 0.332 | Stabilizing | 0.726 | D | 0.491 | neutral | None | None | None | None | N |
E/I | 0.7499 | likely_pathogenic | 0.8158 | pathogenic | 0.255 | Stabilizing | 0.726 | D | 0.668 | neutral | None | None | None | None | N |
E/K | 0.3962 | ambiguous | 0.4396 | ambiguous | 0.507 | Stabilizing | 0.22 | N | 0.492 | neutral | N | 0.473981169 | None | None | N |
E/L | 0.7054 | likely_pathogenic | 0.7346 | pathogenic | 0.255 | Stabilizing | 0.567 | D | 0.649 | neutral | None | None | None | None | N |
E/M | 0.7737 | likely_pathogenic | 0.8073 | pathogenic | 0.176 | Stabilizing | 0.968 | D | 0.655 | neutral | None | None | None | None | N |
E/N | 0.3105 | likely_benign | 0.4069 | ambiguous | 0.169 | Stabilizing | 0.157 | N | 0.487 | neutral | None | None | None | None | N |
E/P | 0.7773 | likely_pathogenic | 0.8228 | pathogenic | 0.143 | Stabilizing | 0.726 | D | 0.527 | neutral | None | None | None | None | N |
E/Q | 0.3259 | likely_benign | 0.3567 | ambiguous | 0.199 | Stabilizing | 0.22 | N | 0.481 | neutral | N | 0.511468128 | None | None | N |
E/R | 0.5254 | ambiguous | 0.5565 | ambiguous | 0.718 | Stabilizing | 0.567 | D | 0.503 | neutral | None | None | None | None | N |
E/S | 0.3014 | likely_benign | 0.364 | ambiguous | 0.041 | Stabilizing | 0.157 | N | 0.482 | neutral | None | None | None | None | N |
E/T | 0.4789 | ambiguous | 0.5777 | pathogenic | 0.182 | Stabilizing | 0.272 | N | 0.531 | neutral | None | None | None | None | N |
E/V | 0.5506 | ambiguous | 0.6219 | pathogenic | 0.143 | Stabilizing | 0.667 | D | 0.587 | neutral | N | 0.50921065 | None | None | N |
E/W | 0.9583 | likely_pathogenic | 0.9676 | pathogenic | 0.027 | Stabilizing | 0.968 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/Y | 0.787 | likely_pathogenic | 0.8417 | pathogenic | 0.167 | Stabilizing | 0.89 | D | 0.641 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.