Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15466 | 46621;46622;46623 | chr2:178620021;178620020;178620019 | chr2:179484748;179484747;179484746 |
N2AB | 13825 | 41698;41699;41700 | chr2:178620021;178620020;178620019 | chr2:179484748;179484747;179484746 |
N2A | 12898 | 38917;38918;38919 | chr2:178620021;178620020;178620019 | chr2:179484748;179484747;179484746 |
N2B | 6401 | 19426;19427;19428 | chr2:178620021;178620020;178620019 | chr2:179484748;179484747;179484746 |
Novex-1 | 6526 | 19801;19802;19803 | chr2:178620021;178620020;178620019 | chr2:179484748;179484747;179484746 |
Novex-2 | 6593 | 20002;20003;20004 | chr2:178620021;178620020;178620019 | chr2:179484748;179484747;179484746 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs758950651 | 0.319 | 0.999 | D | 0.732 | 0.557 | 0.599286835281 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9E-06 | 0 |
D/Y | None | None | 1.0 | D | 0.729 | 0.711 | 0.852740806646 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4534 | ambiguous | 0.5015 | ambiguous | 0.033 | Stabilizing | 0.977 | D | 0.674 | neutral | D | 0.548224273 | None | None | I |
D/C | 0.9249 | likely_pathogenic | 0.9309 | pathogenic | -0.1 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
D/E | 0.198 | likely_benign | 0.2448 | benign | -0.318 | Destabilizing | 0.117 | N | 0.337 | neutral | N | 0.521383108 | None | None | I |
D/F | 0.8515 | likely_pathogenic | 0.873 | pathogenic | -0.09 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
D/G | 0.2335 | likely_benign | 0.2547 | benign | -0.081 | Destabilizing | 0.989 | D | 0.68 | prob.neutral | D | 0.531379809 | None | None | I |
D/H | 0.6491 | likely_pathogenic | 0.6803 | pathogenic | 0.461 | Stabilizing | 0.999 | D | 0.732 | prob.delet. | D | 0.548074467 | None | None | I |
D/I | 0.748 | likely_pathogenic | 0.7809 | pathogenic | 0.264 | Stabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | I |
D/K | 0.6647 | likely_pathogenic | 0.6754 | pathogenic | 0.415 | Stabilizing | 0.99 | D | 0.689 | prob.neutral | None | None | None | None | I |
D/L | 0.742 | likely_pathogenic | 0.7721 | pathogenic | 0.264 | Stabilizing | 0.995 | D | 0.686 | prob.neutral | None | None | None | None | I |
D/M | 0.8478 | likely_pathogenic | 0.8809 | pathogenic | 0.077 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
D/N | 0.174 | likely_benign | 0.2007 | benign | 0.234 | Stabilizing | 0.993 | D | 0.73 | prob.delet. | N | 0.475983161 | None | None | I |
D/P | 0.908 | likely_pathogenic | 0.9351 | pathogenic | 0.206 | Stabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | I |
D/Q | 0.5839 | likely_pathogenic | 0.6211 | pathogenic | 0.222 | Stabilizing | 0.99 | D | 0.727 | prob.delet. | None | None | None | None | I |
D/R | 0.7562 | likely_pathogenic | 0.7421 | pathogenic | 0.631 | Stabilizing | 0.995 | D | 0.685 | prob.neutral | None | None | None | None | I |
D/S | 0.2813 | likely_benign | 0.3235 | benign | 0.129 | Stabilizing | 0.983 | D | 0.655 | neutral | None | None | None | None | I |
D/T | 0.5097 | ambiguous | 0.5548 | ambiguous | 0.219 | Stabilizing | 0.995 | D | 0.704 | prob.neutral | None | None | None | None | I |
D/V | 0.5704 | likely_pathogenic | 0.5999 | pathogenic | 0.206 | Stabilizing | 0.997 | D | 0.696 | prob.neutral | D | 0.602708672 | None | None | I |
D/W | 0.965 | likely_pathogenic | 0.9664 | pathogenic | -0.06 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
D/Y | 0.5492 | ambiguous | 0.5454 | ambiguous | 0.133 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | D | 0.681038194 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.