Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1547 | 4864;4865;4866 | chr2:178777426;178777425;178777424 | chr2:179642153;179642152;179642151 |
N2AB | 1547 | 4864;4865;4866 | chr2:178777426;178777425;178777424 | chr2:179642153;179642152;179642151 |
N2A | 1547 | 4864;4865;4866 | chr2:178777426;178777425;178777424 | chr2:179642153;179642152;179642151 |
N2B | 1501 | 4726;4727;4728 | chr2:178777426;178777425;178777424 | chr2:179642153;179642152;179642151 |
Novex-1 | 1501 | 4726;4727;4728 | chr2:178777426;178777425;178777424 | chr2:179642153;179642152;179642151 |
Novex-2 | 1501 | 4726;4727;4728 | chr2:178777426;178777425;178777424 | chr2:179642153;179642152;179642151 |
Novex-3 | 1547 | 4864;4865;4866 | chr2:178777426;178777425;178777424 | chr2:179642153;179642152;179642151 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | -0.636 | 1.0 | D | 0.852 | 0.738 | 0.867169889803 | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | I | None | 0 | 8.7E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 1.64908E-04 |
V/M | None | -0.636 | 1.0 | D | 0.852 | 0.738 | 0.867169889803 | gnomAD-4.0.0 | 7.5274E-06 | None | None | None | None | I | None | 0 | 8.95095E-05 | None | 0 | 0 | None | 0 | 0 | 6.29624E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6811 | likely_pathogenic | 0.7326 | pathogenic | -1.745 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | D | 0.796051213 | None | None | I |
V/C | 0.9756 | likely_pathogenic | 0.9759 | pathogenic | -1.77 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
V/D | 0.9947 | likely_pathogenic | 0.9963 | pathogenic | -2.815 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
V/E | 0.9784 | likely_pathogenic | 0.9848 | pathogenic | -2.771 | Highly Destabilizing | 1.0 | D | 0.797 | deleterious | D | 0.793960013 | None | None | I |
V/F | 0.9411 | likely_pathogenic | 0.9499 | pathogenic | -1.367 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
V/G | 0.9031 | likely_pathogenic | 0.9253 | pathogenic | -2.075 | Highly Destabilizing | 1.0 | D | 0.756 | deleterious | D | 0.793960013 | None | None | I |
V/H | 0.9973 | likely_pathogenic | 0.9978 | pathogenic | -1.525 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
V/I | 0.1457 | likely_benign | 0.142 | benign | -0.901 | Destabilizing | 0.998 | D | 0.704 | prob.neutral | None | None | None | None | I |
V/K | 0.9861 | likely_pathogenic | 0.99 | pathogenic | -1.489 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
V/L | 0.7894 | likely_pathogenic | 0.7949 | pathogenic | -0.901 | Destabilizing | 0.997 | D | 0.733 | prob.delet. | D | 0.686092661 | None | None | I |
V/M | 0.6819 | likely_pathogenic | 0.7488 | pathogenic | -0.963 | Destabilizing | 1.0 | D | 0.852 | deleterious | D | 0.740419789 | None | None | I |
V/N | 0.9807 | likely_pathogenic | 0.9846 | pathogenic | -1.609 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
V/P | 0.9816 | likely_pathogenic | 0.9814 | pathogenic | -1.153 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
V/Q | 0.9841 | likely_pathogenic | 0.988 | pathogenic | -1.8 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
V/R | 0.9795 | likely_pathogenic | 0.9843 | pathogenic | -0.985 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
V/S | 0.9025 | likely_pathogenic | 0.9246 | pathogenic | -2.036 | Highly Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
V/T | 0.6813 | likely_pathogenic | 0.7265 | pathogenic | -1.889 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | I |
V/W | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -1.63 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
V/Y | 0.9962 | likely_pathogenic | 0.9969 | pathogenic | -1.312 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.