Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15480 | 46663;46664;46665 | chr2:178619879;178619878;178619877 | chr2:179484606;179484605;179484604 |
N2AB | 13839 | 41740;41741;41742 | chr2:178619879;178619878;178619877 | chr2:179484606;179484605;179484604 |
N2A | 12912 | 38959;38960;38961 | chr2:178619879;178619878;178619877 | chr2:179484606;179484605;179484604 |
N2B | 6415 | 19468;19469;19470 | chr2:178619879;178619878;178619877 | chr2:179484606;179484605;179484604 |
Novex-1 | 6540 | 19843;19844;19845 | chr2:178619879;178619878;178619877 | chr2:179484606;179484605;179484604 |
Novex-2 | 6607 | 20044;20045;20046 | chr2:178619879;178619878;178619877 | chr2:179484606;179484605;179484604 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs777031546 | -0.041 | 0.489 | N | 0.575 | 0.345 | 0.535537035517 | gnomAD-2.1.1 | 8.29E-06 | None | None | None | None | N | None | 1.30736E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/L | rs777031546 | -0.041 | 0.489 | N | 0.575 | 0.345 | 0.535537035517 | gnomAD-4.0.0 | 1.60893E-06 | None | None | None | None | N | None | 5.83567E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5821 | likely_pathogenic | 0.5612 | ambiguous | -1.618 | Destabilizing | 0.489 | N | 0.56 | neutral | D | 0.549316858 | None | None | N |
V/C | 0.9406 | likely_pathogenic | 0.9496 | pathogenic | -0.913 | Destabilizing | 0.998 | D | 0.474 | neutral | None | None | None | None | N |
V/D | 0.9431 | likely_pathogenic | 0.9531 | pathogenic | -1.724 | Destabilizing | 0.942 | D | 0.561 | neutral | D | 0.548318616 | None | None | N |
V/E | 0.8685 | likely_pathogenic | 0.8962 | pathogenic | -1.711 | Destabilizing | 0.978 | D | 0.513 | neutral | None | None | None | None | N |
V/F | 0.699 | likely_pathogenic | 0.7108 | pathogenic | -1.244 | Destabilizing | 0.942 | D | 0.425 | neutral | D | 0.548636211 | None | None | N |
V/G | 0.8101 | likely_pathogenic | 0.8268 | pathogenic | -1.949 | Destabilizing | 0.014 | N | 0.449 | neutral | D | 0.548163636 | None | None | N |
V/H | 0.9766 | likely_pathogenic | 0.982 | pathogenic | -1.605 | Destabilizing | 0.998 | D | 0.587 | neutral | None | None | None | None | N |
V/I | 0.1114 | likely_benign | 0.104 | benign | -0.791 | Destabilizing | 0.014 | N | 0.395 | neutral | D | 0.533654946 | None | None | N |
V/K | 0.9356 | likely_pathogenic | 0.9547 | pathogenic | -1.509 | Destabilizing | 0.956 | D | 0.515 | neutral | None | None | None | None | N |
V/L | 0.4693 | ambiguous | 0.4544 | ambiguous | -0.791 | Destabilizing | 0.489 | N | 0.575 | neutral | N | 0.509664416 | None | None | N |
V/M | 0.4656 | ambiguous | 0.4591 | ambiguous | -0.531 | Destabilizing | 0.956 | D | 0.454 | neutral | None | None | None | None | N |
V/N | 0.8901 | likely_pathogenic | 0.9026 | pathogenic | -1.226 | Destabilizing | 0.956 | D | 0.556 | neutral | None | None | None | None | N |
V/P | 0.7906 | likely_pathogenic | 0.784 | pathogenic | -1.034 | Destabilizing | 0.993 | D | 0.503 | neutral | None | None | None | None | N |
V/Q | 0.9126 | likely_pathogenic | 0.929 | pathogenic | -1.38 | Destabilizing | 0.993 | D | 0.511 | neutral | None | None | None | None | N |
V/R | 0.9028 | likely_pathogenic | 0.93 | pathogenic | -0.979 | Destabilizing | 0.978 | D | 0.559 | neutral | None | None | None | None | N |
V/S | 0.777 | likely_pathogenic | 0.7951 | pathogenic | -1.665 | Destabilizing | 0.956 | D | 0.424 | neutral | None | None | None | None | N |
V/T | 0.4852 | ambiguous | 0.5179 | ambiguous | -1.549 | Destabilizing | 0.86 | D | 0.456 | neutral | None | None | None | None | N |
V/W | 0.9832 | likely_pathogenic | 0.9877 | pathogenic | -1.494 | Destabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | N |
V/Y | 0.9479 | likely_pathogenic | 0.9567 | pathogenic | -1.221 | Destabilizing | 0.993 | D | 0.437 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.