Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15481 | 46666;46667;46668 | chr2:178619876;178619875;178619874 | chr2:179484603;179484602;179484601 |
N2AB | 13840 | 41743;41744;41745 | chr2:178619876;178619875;178619874 | chr2:179484603;179484602;179484601 |
N2A | 12913 | 38962;38963;38964 | chr2:178619876;178619875;178619874 | chr2:179484603;179484602;179484601 |
N2B | 6416 | 19471;19472;19473 | chr2:178619876;178619875;178619874 | chr2:179484603;179484602;179484601 |
Novex-1 | 6541 | 19846;19847;19848 | chr2:178619876;178619875;178619874 | chr2:179484603;179484602;179484601 |
Novex-2 | 6608 | 20047;20048;20049 | chr2:178619876;178619875;178619874 | chr2:179484603;179484602;179484601 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 1.0 | D | 0.591 | 0.421 | 0.461323234107 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4961 | ambiguous | 0.4694 | ambiguous | -0.356 | Destabilizing | 0.999 | D | 0.568 | neutral | D | 0.590727911 | None | None | N |
E/C | 0.9732 | likely_pathogenic | 0.9777 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/D | 0.3394 | likely_benign | 0.3383 | benign | -0.479 | Destabilizing | 0.999 | D | 0.406 | neutral | D | 0.543686399 | None | None | N |
E/F | 0.9638 | likely_pathogenic | 0.9702 | pathogenic | 0.068 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/G | 0.6515 | likely_pathogenic | 0.5988 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.633 | neutral | D | 0.547045194 | None | None | N |
E/H | 0.8044 | likely_pathogenic | 0.8228 | pathogenic | 0.461 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/I | 0.7946 | likely_pathogenic | 0.8234 | pathogenic | 0.26 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/K | 0.5039 | ambiguous | 0.4936 | ambiguous | 0.15 | Stabilizing | 0.999 | D | 0.527 | neutral | D | 0.536286026 | None | None | N |
E/L | 0.8519 | likely_pathogenic | 0.869 | pathogenic | 0.26 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/M | 0.8325 | likely_pathogenic | 0.8502 | pathogenic | 0.138 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/N | 0.5958 | likely_pathogenic | 0.6098 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/P | 0.9892 | likely_pathogenic | 0.9901 | pathogenic | 0.075 | Stabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/Q | 0.3025 | likely_benign | 0.2937 | benign | -0.318 | Destabilizing | 1.0 | D | 0.591 | neutral | D | 0.548071407 | None | None | N |
E/R | 0.6422 | likely_pathogenic | 0.6423 | pathogenic | 0.551 | Stabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/S | 0.5332 | ambiguous | 0.524 | ambiguous | -0.562 | Destabilizing | 0.999 | D | 0.581 | neutral | None | None | None | None | N |
E/T | 0.5358 | ambiguous | 0.5399 | ambiguous | -0.351 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
E/V | 0.5586 | ambiguous | 0.5998 | pathogenic | 0.075 | Stabilizing | 1.0 | D | 0.643 | neutral | D | 0.592405837 | None | None | N |
E/W | 0.9896 | likely_pathogenic | 0.9915 | pathogenic | 0.286 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/Y | 0.9262 | likely_pathogenic | 0.9381 | pathogenic | 0.325 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.