Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15483 | 46672;46673;46674 | chr2:178619870;178619869;178619868 | chr2:179484597;179484596;179484595 |
N2AB | 13842 | 41749;41750;41751 | chr2:178619870;178619869;178619868 | chr2:179484597;179484596;179484595 |
N2A | 12915 | 38968;38969;38970 | chr2:178619870;178619869;178619868 | chr2:179484597;179484596;179484595 |
N2B | 6418 | 19477;19478;19479 | chr2:178619870;178619869;178619868 | chr2:179484597;179484596;179484595 |
Novex-1 | 6543 | 19852;19853;19854 | chr2:178619870;178619869;178619868 | chr2:179484597;179484596;179484595 |
Novex-2 | 6610 | 20053;20054;20055 | chr2:178619870;178619869;178619868 | chr2:179484597;179484596;179484595 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.198 | N | 0.202 | 0.256 | 0.634606890218 | gnomAD-4.0.0 | 1.59994E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86775E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6876 | likely_pathogenic | 0.7281 | pathogenic | -1.306 | Destabilizing | 0.983 | D | 0.417 | neutral | None | None | None | None | N |
I/C | 0.8541 | likely_pathogenic | 0.8915 | pathogenic | -0.671 | Destabilizing | 1.0 | D | 0.553 | neutral | None | None | None | None | N |
I/D | 0.9277 | likely_pathogenic | 0.9515 | pathogenic | -0.935 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
I/E | 0.7999 | likely_pathogenic | 0.8459 | pathogenic | -0.988 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
I/F | 0.378 | ambiguous | 0.4166 | ambiguous | -1.013 | Destabilizing | 0.997 | D | 0.486 | neutral | D | 0.539230294 | None | None | N |
I/G | 0.8848 | likely_pathogenic | 0.9152 | pathogenic | -1.556 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
I/H | 0.7497 | likely_pathogenic | 0.812 | pathogenic | -0.771 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
I/K | 0.5686 | likely_pathogenic | 0.6462 | pathogenic | -0.932 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
I/L | 0.179 | likely_benign | 0.1771 | benign | -0.724 | Destabilizing | 0.798 | D | 0.333 | neutral | N | 0.454142723 | None | None | N |
I/M | 0.2203 | likely_benign | 0.2336 | benign | -0.509 | Destabilizing | 0.997 | D | 0.485 | neutral | D | 0.529182271 | None | None | N |
I/N | 0.5764 | likely_pathogenic | 0.6633 | pathogenic | -0.66 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | D | 0.547474159 | None | None | N |
I/P | 0.9604 | likely_pathogenic | 0.9601 | pathogenic | -0.886 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
I/Q | 0.6453 | likely_pathogenic | 0.7074 | pathogenic | -0.909 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
I/R | 0.5097 | ambiguous | 0.5943 | pathogenic | -0.247 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
I/S | 0.589 | likely_pathogenic | 0.6597 | pathogenic | -1.143 | Destabilizing | 0.997 | D | 0.581 | neutral | D | 0.529398576 | None | None | N |
I/T | 0.3864 | ambiguous | 0.4111 | ambiguous | -1.095 | Destabilizing | 0.978 | D | 0.468 | neutral | N | 0.516379705 | None | None | N |
I/V | 0.1104 | likely_benign | 0.1092 | benign | -0.886 | Destabilizing | 0.198 | N | 0.202 | neutral | N | 0.466756283 | None | None | N |
I/W | 0.9121 | likely_pathogenic | 0.9346 | pathogenic | -1.051 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
I/Y | 0.7612 | likely_pathogenic | 0.8198 | pathogenic | -0.85 | Destabilizing | 0.999 | D | 0.545 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.