Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15493 | 46702;46703;46704 | chr2:178619840;178619839;178619838 | chr2:179484567;179484566;179484565 |
N2AB | 13852 | 41779;41780;41781 | chr2:178619840;178619839;178619838 | chr2:179484567;179484566;179484565 |
N2A | 12925 | 38998;38999;39000 | chr2:178619840;178619839;178619838 | chr2:179484567;179484566;179484565 |
N2B | 6428 | 19507;19508;19509 | chr2:178619840;178619839;178619838 | chr2:179484567;179484566;179484565 |
Novex-1 | 6553 | 19882;19883;19884 | chr2:178619840;178619839;178619838 | chr2:179484567;179484566;179484565 |
Novex-2 | 6620 | 20083;20084;20085 | chr2:178619840;178619839;178619838 | chr2:179484567;179484566;179484565 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1173523537 | -0.982 | 1.0 | N | 0.76 | 0.389 | 0.393775345888 | gnomAD-4.0.0 | 1.59509E-06 | None | None | None | None | N | None | 0 | 2.29263E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1848 | likely_benign | 0.1562 | benign | -1.028 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.470006298 | None | None | N |
P/C | 0.8755 | likely_pathogenic | 0.8557 | pathogenic | -0.714 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
P/D | 0.9009 | likely_pathogenic | 0.8801 | pathogenic | -0.722 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
P/E | 0.6404 | likely_pathogenic | 0.5722 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
P/F | 0.8909 | likely_pathogenic | 0.8664 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
P/G | 0.7361 | likely_pathogenic | 0.7173 | pathogenic | -1.266 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
P/H | 0.6566 | likely_pathogenic | 0.6183 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.510643067 | None | None | N |
P/I | 0.574 | likely_pathogenic | 0.5201 | ambiguous | -0.51 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
P/K | 0.7131 | likely_pathogenic | 0.6832 | pathogenic | -0.891 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
P/L | 0.352 | ambiguous | 0.3087 | benign | -0.51 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.49229957 | None | None | N |
P/M | 0.6775 | likely_pathogenic | 0.6231 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
P/N | 0.8271 | likely_pathogenic | 0.8055 | pathogenic | -0.601 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
P/Q | 0.4881 | ambiguous | 0.4489 | ambiguous | -0.816 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
P/R | 0.5473 | ambiguous | 0.5165 | ambiguous | -0.338 | Destabilizing | 1.0 | D | 0.793 | deleterious | N | 0.484543749 | None | None | N |
P/S | 0.415 | ambiguous | 0.3768 | ambiguous | -1.049 | Destabilizing | 1.0 | D | 0.76 | deleterious | N | 0.503505563 | None | None | N |
P/T | 0.3144 | likely_benign | 0.2787 | benign | -1.003 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.464857289 | None | None | N |
P/V | 0.399 | ambiguous | 0.3579 | ambiguous | -0.646 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
P/W | 0.9462 | likely_pathogenic | 0.9327 | pathogenic | -1.066 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
P/Y | 0.8648 | likely_pathogenic | 0.8476 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.