Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15494 | 46705;46706;46707 | chr2:178619837;178619836;178619835 | chr2:179484564;179484563;179484562 |
N2AB | 13853 | 41782;41783;41784 | chr2:178619837;178619836;178619835 | chr2:179484564;179484563;179484562 |
N2A | 12926 | 39001;39002;39003 | chr2:178619837;178619836;178619835 | chr2:179484564;179484563;179484562 |
N2B | 6429 | 19510;19511;19512 | chr2:178619837;178619836;178619835 | chr2:179484564;179484563;179484562 |
Novex-1 | 6554 | 19885;19886;19887 | chr2:178619837;178619836;178619835 | chr2:179484564;179484563;179484562 |
Novex-2 | 6621 | 20086;20087;20088 | chr2:178619837;178619836;178619835 | chr2:179484564;179484563;179484562 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs1433448268 | -0.054 | 1.0 | D | 0.812 | 0.798 | 0.929971040554 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
G/V | rs1433448268 | -0.054 | 1.0 | D | 0.812 | 0.798 | 0.929971040554 | gnomAD-4.0.0 | 1.59492E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86454E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4363 | ambiguous | 0.4113 | ambiguous | -0.584 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.597559635 | None | None | N |
G/C | 0.6341 | likely_pathogenic | 0.6145 | pathogenic | -0.915 | Destabilizing | 1.0 | D | 0.82 | deleterious | D | 0.636383633 | None | None | N |
G/D | 0.5315 | ambiguous | 0.5113 | ambiguous | -1.042 | Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.575643878 | None | None | N |
G/E | 0.5456 | ambiguous | 0.5189 | ambiguous | -1.192 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
G/F | 0.9006 | likely_pathogenic | 0.8872 | pathogenic | -1.243 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
G/H | 0.7049 | likely_pathogenic | 0.6835 | pathogenic | -0.906 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
G/I | 0.917 | likely_pathogenic | 0.8932 | pathogenic | -0.591 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
G/K | 0.722 | likely_pathogenic | 0.7107 | pathogenic | -1.138 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
G/L | 0.8419 | likely_pathogenic | 0.8225 | pathogenic | -0.591 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
G/M | 0.8642 | likely_pathogenic | 0.8478 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
G/N | 0.5104 | ambiguous | 0.5116 | ambiguous | -0.761 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
G/P | 0.9891 | likely_pathogenic | 0.9867 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
G/Q | 0.614 | likely_pathogenic | 0.6016 | pathogenic | -1.078 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
G/R | 0.5888 | likely_pathogenic | 0.5735 | pathogenic | -0.614 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.636852509 | None | None | N |
G/S | 0.2753 | likely_benign | 0.2593 | benign | -0.902 | Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.597668545 | None | None | N |
G/T | 0.5647 | likely_pathogenic | 0.5388 | ambiguous | -0.988 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
G/V | 0.8143 | likely_pathogenic | 0.7727 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.812 | deleterious | D | 0.636569435 | None | None | N |
G/W | 0.8445 | likely_pathogenic | 0.8069 | pathogenic | -1.421 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
G/Y | 0.8256 | likely_pathogenic | 0.7999 | pathogenic | -1.081 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.