Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15496 | 46711;46712;46713 | chr2:178619831;178619830;178619829 | chr2:179484558;179484557;179484556 |
N2AB | 13855 | 41788;41789;41790 | chr2:178619831;178619830;178619829 | chr2:179484558;179484557;179484556 |
N2A | 12928 | 39007;39008;39009 | chr2:178619831;178619830;178619829 | chr2:179484558;179484557;179484556 |
N2B | 6431 | 19516;19517;19518 | chr2:178619831;178619830;178619829 | chr2:179484558;179484557;179484556 |
Novex-1 | 6556 | 19891;19892;19893 | chr2:178619831;178619830;178619829 | chr2:179484558;179484557;179484556 |
Novex-2 | 6623 | 20092;20093;20094 | chr2:178619831;178619830;178619829 | chr2:179484558;179484557;179484556 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | rs755301020 | None | 1.0 | N | 0.85 | 0.606 | 0.741726271847 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5446 | ambiguous | 0.4845 | ambiguous | -0.408 | Destabilizing | 1.0 | D | 0.807 | deleterious | D | 0.582904669 | None | None | N |
D/C | 0.9332 | likely_pathogenic | 0.9273 | pathogenic | -0.067 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
D/E | 0.5228 | ambiguous | 0.4769 | ambiguous | -0.507 | Destabilizing | 1.0 | D | 0.445 | neutral | N | 0.500249582 | None | None | N |
D/F | 0.9506 | likely_pathogenic | 0.9436 | pathogenic | -0.329 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
D/G | 0.5817 | likely_pathogenic | 0.5239 | ambiguous | -0.662 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.587529184 | None | None | N |
D/H | 0.7601 | likely_pathogenic | 0.7224 | pathogenic | -0.45 | Destabilizing | 1.0 | D | 0.762 | deleterious | D | 0.588100865 | None | None | N |
D/I | 0.8922 | likely_pathogenic | 0.8881 | pathogenic | 0.227 | Stabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
D/K | 0.8572 | likely_pathogenic | 0.838 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
D/L | 0.8879 | likely_pathogenic | 0.8675 | pathogenic | 0.227 | Stabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
D/M | 0.9384 | likely_pathogenic | 0.9264 | pathogenic | 0.512 | Stabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
D/N | 0.2642 | likely_benign | 0.2352 | benign | -0.366 | Destabilizing | 1.0 | D | 0.673 | neutral | N | 0.508512571 | None | None | N |
D/P | 0.8811 | likely_pathogenic | 0.849 | pathogenic | 0.039 | Stabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
D/Q | 0.8046 | likely_pathogenic | 0.7682 | pathogenic | -0.305 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
D/R | 0.8706 | likely_pathogenic | 0.849 | pathogenic | 0.044 | Stabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
D/S | 0.3049 | likely_benign | 0.2704 | benign | -0.528 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
D/T | 0.6091 | likely_pathogenic | 0.5696 | pathogenic | -0.338 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
D/V | 0.7316 | likely_pathogenic | 0.7015 | pathogenic | 0.039 | Stabilizing | 1.0 | D | 0.85 | deleterious | N | 0.502860038 | None | None | N |
D/W | 0.9869 | likely_pathogenic | 0.9858 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
D/Y | 0.7338 | likely_pathogenic | 0.697 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.83 | deleterious | D | 0.589039986 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.