Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15502 | 46729;46730;46731 | chr2:178619813;178619812;178619811 | chr2:179484540;179484539;179484538 |
N2AB | 13861 | 41806;41807;41808 | chr2:178619813;178619812;178619811 | chr2:179484540;179484539;179484538 |
N2A | 12934 | 39025;39026;39027 | chr2:178619813;178619812;178619811 | chr2:179484540;179484539;179484538 |
N2B | 6437 | 19534;19535;19536 | chr2:178619813;178619812;178619811 | chr2:179484540;179484539;179484538 |
Novex-1 | 6562 | 19909;19910;19911 | chr2:178619813;178619812;178619811 | chr2:179484540;179484539;179484538 |
Novex-2 | 6629 | 20110;20111;20112 | chr2:178619813;178619812;178619811 | chr2:179484540;179484539;179484538 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | D | 0.499 | 0.389 | 0.536988229258 | gnomAD-4.0.0 | 6.84809E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16028E-05 | 0 |
E/Q | rs2057996369 | None | 1.0 | D | 0.597 | 0.342 | 0.423597194605 | gnomAD-4.0.0 | 6.84809E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00087E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6634 | likely_pathogenic | 0.6952 | pathogenic | -0.98 | Destabilizing | 0.999 | D | 0.625 | neutral | D | 0.572361583 | None | None | N |
E/C | 0.9743 | likely_pathogenic | 0.9857 | pathogenic | -0.67 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/D | 0.8342 | likely_pathogenic | 0.8604 | pathogenic | -1.452 | Destabilizing | 0.999 | D | 0.463 | neutral | D | 0.613618665 | None | None | N |
E/F | 0.9724 | likely_pathogenic | 0.9846 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
E/G | 0.8746 | likely_pathogenic | 0.8701 | pathogenic | -1.398 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | D | 0.615900385 | None | None | N |
E/H | 0.9331 | likely_pathogenic | 0.9465 | pathogenic | -0.803 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/I | 0.815 | likely_pathogenic | 0.8948 | pathogenic | 0.189 | Stabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
E/K | 0.7984 | likely_pathogenic | 0.8332 | pathogenic | -1.224 | Destabilizing | 0.999 | D | 0.499 | neutral | D | 0.567723416 | None | None | N |
E/L | 0.9093 | likely_pathogenic | 0.9463 | pathogenic | 0.189 | Stabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
E/M | 0.872 | likely_pathogenic | 0.9238 | pathogenic | 0.755 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
E/N | 0.927 | likely_pathogenic | 0.948 | pathogenic | -1.593 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/P | 0.9969 | likely_pathogenic | 0.9958 | pathogenic | -0.181 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/Q | 0.4686 | ambiguous | 0.5076 | ambiguous | -1.371 | Destabilizing | 1.0 | D | 0.597 | neutral | D | 0.544488135 | None | None | N |
E/R | 0.8647 | likely_pathogenic | 0.8865 | pathogenic | -0.992 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/S | 0.7502 | likely_pathogenic | 0.7699 | pathogenic | -2.067 | Highly Destabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | N |
E/T | 0.7693 | likely_pathogenic | 0.8262 | pathogenic | -1.712 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/V | 0.6214 | likely_pathogenic | 0.7411 | pathogenic | -0.181 | Destabilizing | 1.0 | D | 0.76 | deleterious | D | 0.533657306 | None | None | N |
E/W | 0.9925 | likely_pathogenic | 0.9957 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/Y | 0.9602 | likely_pathogenic | 0.9729 | pathogenic | -0.242 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.