Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15503 | 46732;46733;46734 | chr2:178619810;178619809;178619808 | chr2:179484537;179484536;179484535 |
N2AB | 13862 | 41809;41810;41811 | chr2:178619810;178619809;178619808 | chr2:179484537;179484536;179484535 |
N2A | 12935 | 39028;39029;39030 | chr2:178619810;178619809;178619808 | chr2:179484537;179484536;179484535 |
N2B | 6438 | 19537;19538;19539 | chr2:178619810;178619809;178619808 | chr2:179484537;179484536;179484535 |
Novex-1 | 6563 | 19912;19913;19914 | chr2:178619810;178619809;178619808 | chr2:179484537;179484536;179484535 |
Novex-2 | 6630 | 20113;20114;20115 | chr2:178619810;178619809;178619808 | chr2:179484537;179484536;179484535 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.999 | N | 0.53 | 0.215 | 0.326881540566 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9418 | likely_pathogenic | 0.9388 | pathogenic | -2.998 | Highly Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | N |
L/C | 0.8999 | likely_pathogenic | 0.9209 | pathogenic | -2.316 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -3.618 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
L/E | 0.9955 | likely_pathogenic | 0.9956 | pathogenic | -3.372 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/F | 0.9104 | likely_pathogenic | 0.9232 | pathogenic | -1.663 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.512350285 | None | None | N |
L/G | 0.987 | likely_pathogenic | 0.9891 | pathogenic | -3.534 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/H | 0.9942 | likely_pathogenic | 0.9942 | pathogenic | -2.935 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | D | 0.555963575 | None | None | N |
L/I | 0.3442 | ambiguous | 0.3117 | benign | -1.406 | Destabilizing | 0.999 | D | 0.529 | neutral | N | 0.484652081 | None | None | N |
L/K | 0.9926 | likely_pathogenic | 0.9934 | pathogenic | -2.337 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
L/M | 0.4792 | ambiguous | 0.495 | ambiguous | -1.499 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
L/N | 0.9948 | likely_pathogenic | 0.9942 | pathogenic | -2.789 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
L/P | 0.9959 | likely_pathogenic | 0.9972 | pathogenic | -1.925 | Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.555963575 | None | None | N |
L/Q | 0.9911 | likely_pathogenic | 0.9895 | pathogenic | -2.605 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/R | 0.987 | likely_pathogenic | 0.9887 | pathogenic | -2.024 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.555963575 | None | None | N |
L/S | 0.9935 | likely_pathogenic | 0.9928 | pathogenic | -3.408 | Highly Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
L/T | 0.9221 | likely_pathogenic | 0.9103 | pathogenic | -3.031 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/V | 0.3092 | likely_benign | 0.2378 | benign | -1.925 | Destabilizing | 0.999 | D | 0.53 | neutral | N | 0.459898247 | None | None | N |
L/W | 0.9915 | likely_pathogenic | 0.9932 | pathogenic | -2.114 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/Y | 0.9909 | likely_pathogenic | 0.9916 | pathogenic | -1.945 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.