Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15504 | 46735;46736;46737 | chr2:178619807;178619806;178619805 | chr2:179484534;179484533;179484532 |
N2AB | 13863 | 41812;41813;41814 | chr2:178619807;178619806;178619805 | chr2:179484534;179484533;179484532 |
N2A | 12936 | 39031;39032;39033 | chr2:178619807;178619806;178619805 | chr2:179484534;179484533;179484532 |
N2B | 6439 | 19540;19541;19542 | chr2:178619807;178619806;178619805 | chr2:179484534;179484533;179484532 |
Novex-1 | 6564 | 19915;19916;19917 | chr2:178619807;178619806;178619805 | chr2:179484534;179484533;179484532 |
Novex-2 | 6631 | 20116;20117;20118 | chr2:178619807;178619806;178619805 | chr2:179484534;179484533;179484532 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1184631064 | 0.004 | 0.904 | N | 0.398 | 0.361 | 0.193865811164 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 5.81E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/S | rs1184631064 | 0.004 | 0.904 | N | 0.398 | 0.361 | 0.193865811164 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs1184631064 | 0.004 | 0.904 | N | 0.398 | 0.361 | 0.193865811164 | gnomAD-4.0.0 | 6.82305E-06 | None | None | None | None | N | None | 1.33711E-05 | 6.68181E-05 | None | 0 | 0 | None | 0 | 0 | 5.08943E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.8881 | likely_pathogenic | 0.9049 | pathogenic | -0.542 | Destabilizing | 0.86 | D | 0.504 | neutral | None | None | None | None | N |
N/C | 0.8692 | likely_pathogenic | 0.9017 | pathogenic | 0.14 | Stabilizing | 0.998 | D | 0.628 | neutral | None | None | None | None | N |
N/D | 0.6112 | likely_pathogenic | 0.6973 | pathogenic | 0.112 | Stabilizing | 0.966 | D | 0.441 | neutral | N | 0.508993292 | None | None | N |
N/E | 0.9597 | likely_pathogenic | 0.973 | pathogenic | 0.165 | Stabilizing | 0.993 | D | 0.512 | neutral | None | None | None | None | N |
N/F | 0.9825 | likely_pathogenic | 0.9863 | pathogenic | -0.491 | Destabilizing | 0.956 | D | 0.653 | neutral | None | None | None | None | N |
N/G | 0.8513 | likely_pathogenic | 0.8719 | pathogenic | -0.827 | Destabilizing | 0.926 | D | 0.401 | neutral | None | None | None | None | N |
N/H | 0.7178 | likely_pathogenic | 0.7719 | pathogenic | -0.578 | Destabilizing | 0.99 | D | 0.555 | neutral | N | 0.511093189 | None | None | N |
N/I | 0.918 | likely_pathogenic | 0.93 | pathogenic | 0.153 | Stabilizing | 0.032 | N | 0.407 | neutral | N | 0.508993292 | None | None | N |
N/K | 0.981 | likely_pathogenic | 0.9863 | pathogenic | -0.035 | Destabilizing | 0.971 | D | 0.51 | neutral | N | 0.496054513 | None | None | N |
N/L | 0.8988 | likely_pathogenic | 0.913 | pathogenic | 0.153 | Stabilizing | 0.514 | D | 0.517 | neutral | None | None | None | None | N |
N/M | 0.9367 | likely_pathogenic | 0.9516 | pathogenic | 0.351 | Stabilizing | 0.988 | D | 0.597 | neutral | None | None | None | None | N |
N/P | 0.969 | likely_pathogenic | 0.9601 | pathogenic | -0.049 | Destabilizing | 0.993 | D | 0.606 | neutral | None | None | None | None | N |
N/Q | 0.9363 | likely_pathogenic | 0.955 | pathogenic | -0.526 | Destabilizing | 0.993 | D | 0.547 | neutral | None | None | None | None | N |
N/R | 0.9703 | likely_pathogenic | 0.9763 | pathogenic | -0.043 | Destabilizing | 0.993 | D | 0.56 | neutral | None | None | None | None | N |
N/S | 0.184 | likely_benign | 0.2004 | benign | -0.54 | Destabilizing | 0.904 | D | 0.398 | neutral | N | 0.393099612 | None | None | N |
N/T | 0.5349 | ambiguous | 0.6055 | pathogenic | -0.304 | Destabilizing | 0.822 | D | 0.464 | neutral | N | 0.472487212 | None | None | N |
N/V | 0.9012 | likely_pathogenic | 0.9197 | pathogenic | -0.049 | Destabilizing | 0.514 | D | 0.537 | neutral | None | None | None | None | N |
N/W | 0.9909 | likely_pathogenic | 0.9936 | pathogenic | -0.339 | Destabilizing | 0.998 | D | 0.676 | prob.neutral | None | None | None | None | N |
N/Y | 0.8589 | likely_pathogenic | 0.8869 | pathogenic | -0.106 | Destabilizing | 0.971 | D | 0.611 | neutral | N | 0.5112759 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.