Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15507 | 46744;46745;46746 | chr2:178619798;178619797;178619796 | chr2:179484525;179484524;179484523 |
N2AB | 13866 | 41821;41822;41823 | chr2:178619798;178619797;178619796 | chr2:179484525;179484524;179484523 |
N2A | 12939 | 39040;39041;39042 | chr2:178619798;178619797;178619796 | chr2:179484525;179484524;179484523 |
N2B | 6442 | 19549;19550;19551 | chr2:178619798;178619797;178619796 | chr2:179484525;179484524;179484523 |
Novex-1 | 6567 | 19924;19925;19926 | chr2:178619798;178619797;178619796 | chr2:179484525;179484524;179484523 |
Novex-2 | 6634 | 20125;20126;20127 | chr2:178619798;178619797;178619796 | chr2:179484525;179484524;179484523 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs781291079 | 0.25 | 0.549 | N | 0.385 | 0.164 | 0.112648838833 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.93E-06 | 0 |
K/N | rs781291079 | 0.25 | 0.549 | N | 0.385 | 0.164 | 0.112648838833 | gnomAD-4.0.0 | 3.42382E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.7002E-06 | 1.16012E-05 | 1.65865E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2698 | likely_benign | 0.3329 | benign | -0.019 | Destabilizing | 0.25 | N | 0.431 | neutral | None | None | None | None | N |
K/C | 0.6596 | likely_pathogenic | 0.7825 | pathogenic | -0.486 | Destabilizing | 0.992 | D | 0.421 | neutral | None | None | None | None | N |
K/D | 0.3478 | ambiguous | 0.4003 | ambiguous | -0.341 | Destabilizing | 0.617 | D | 0.485 | neutral | None | None | None | None | N |
K/E | 0.1769 | likely_benign | 0.2137 | benign | -0.362 | Destabilizing | 0.334 | N | 0.391 | neutral | N | 0.461009681 | None | None | N |
K/F | 0.7858 | likely_pathogenic | 0.8442 | pathogenic | -0.387 | Destabilizing | 0.972 | D | 0.425 | neutral | None | None | None | None | N |
K/G | 0.2031 | likely_benign | 0.29 | benign | -0.129 | Destabilizing | 0.002 | N | 0.251 | neutral | None | None | None | None | N |
K/H | 0.2498 | likely_benign | 0.2989 | benign | -0.21 | Destabilizing | 0.92 | D | 0.431 | neutral | None | None | None | None | N |
K/I | 0.547 | ambiguous | 0.5888 | pathogenic | 0.187 | Stabilizing | 0.92 | D | 0.437 | neutral | None | None | None | None | N |
K/L | 0.4267 | ambiguous | 0.5004 | ambiguous | 0.187 | Stabilizing | 0.617 | D | 0.493 | neutral | None | None | None | None | N |
K/M | 0.286 | likely_benign | 0.3593 | ambiguous | -0.142 | Destabilizing | 0.963 | D | 0.427 | neutral | N | 0.456892936 | None | None | N |
K/N | 0.2518 | likely_benign | 0.3101 | benign | -0.025 | Destabilizing | 0.549 | D | 0.385 | neutral | N | 0.440136548 | None | None | N |
K/P | 0.8023 | likely_pathogenic | 0.7874 | pathogenic | 0.14 | Stabilizing | 0.972 | D | 0.443 | neutral | None | None | None | None | N |
K/Q | 0.1291 | likely_benign | 0.155 | benign | -0.175 | Destabilizing | 0.549 | D | 0.409 | neutral | N | 0.482079375 | None | None | N |
K/R | 0.0796 | likely_benign | 0.0837 | benign | -0.138 | Destabilizing | 0.001 | N | 0.223 | neutral | N | 0.4247239 | None | None | N |
K/S | 0.2932 | likely_benign | 0.3657 | ambiguous | -0.38 | Destabilizing | 0.4 | N | 0.371 | neutral | None | None | None | None | N |
K/T | 0.1708 | likely_benign | 0.1936 | benign | -0.292 | Destabilizing | 0.549 | D | 0.478 | neutral | N | 0.434814902 | None | None | N |
K/V | 0.4467 | ambiguous | 0.4944 | ambiguous | 0.14 | Stabilizing | 0.766 | D | 0.465 | neutral | None | None | None | None | N |
K/W | 0.7869 | likely_pathogenic | 0.8431 | pathogenic | -0.493 | Destabilizing | 0.992 | D | 0.437 | neutral | None | None | None | None | N |
K/Y | 0.6215 | likely_pathogenic | 0.7053 | pathogenic | -0.146 | Destabilizing | 0.972 | D | 0.447 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.