Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15519 | 46780;46781;46782 | chr2:178619762;178619761;178619760 | chr2:179484489;179484488;179484487 |
N2AB | 13878 | 41857;41858;41859 | chr2:178619762;178619761;178619760 | chr2:179484489;179484488;179484487 |
N2A | 12951 | 39076;39077;39078 | chr2:178619762;178619761;178619760 | chr2:179484489;179484488;179484487 |
N2B | 6454 | 19585;19586;19587 | chr2:178619762;178619761;178619760 | chr2:179484489;179484488;179484487 |
Novex-1 | 6579 | 19960;19961;19962 | chr2:178619762;178619761;178619760 | chr2:179484489;179484488;179484487 |
Novex-2 | 6646 | 20161;20162;20163 | chr2:178619762;178619761;178619760 | chr2:179484489;179484488;179484487 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1277355095 | -0.782 | None | N | 0.214 | 0.094 | 0.253205268125 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
V/I | rs1277355095 | -0.782 | None | N | 0.214 | 0.094 | 0.253205268125 | gnomAD-4.0.0 | 1.36941E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80012E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.702 | likely_pathogenic | 0.7481 | pathogenic | -1.932 | Destabilizing | 0.104 | N | 0.567 | neutral | N | 0.514535014 | None | None | N |
V/C | 0.9204 | likely_pathogenic | 0.9562 | pathogenic | -1.168 | Destabilizing | 0.968 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/D | 0.9875 | likely_pathogenic | 0.9865 | pathogenic | -2.49 | Highly Destabilizing | 0.667 | D | 0.804 | deleterious | N | 0.517721271 | None | None | N |
V/E | 0.9663 | likely_pathogenic | 0.9643 | pathogenic | -2.336 | Highly Destabilizing | 0.726 | D | 0.742 | deleterious | None | None | None | None | N |
V/F | 0.6225 | likely_pathogenic | 0.5971 | pathogenic | -1.316 | Destabilizing | 0.497 | N | 0.724 | prob.delet. | N | 0.514724825 | None | None | N |
V/G | 0.9095 | likely_pathogenic | 0.9131 | pathogenic | -2.381 | Highly Destabilizing | 0.667 | D | 0.773 | deleterious | N | 0.516904699 | None | None | N |
V/H | 0.985 | likely_pathogenic | 0.987 | pathogenic | -2.087 | Highly Destabilizing | 0.968 | D | 0.8 | deleterious | None | None | None | None | N |
V/I | 0.0537 | likely_benign | 0.0635 | benign | -0.71 | Destabilizing | None | N | 0.214 | neutral | N | 0.423920056 | None | None | N |
V/K | 0.977 | likely_pathogenic | 0.9764 | pathogenic | -1.702 | Destabilizing | 0.726 | D | 0.745 | deleterious | None | None | None | None | N |
V/L | 0.2572 | likely_benign | 0.2958 | benign | -0.71 | Destabilizing | 0.009 | N | 0.394 | neutral | N | 0.411097736 | None | None | N |
V/M | 0.3511 | ambiguous | 0.4166 | ambiguous | -0.496 | Destabilizing | 0.567 | D | 0.609 | neutral | None | None | None | None | N |
V/N | 0.9477 | likely_pathogenic | 0.9588 | pathogenic | -1.794 | Destabilizing | 0.89 | D | 0.817 | deleterious | None | None | None | None | N |
V/P | 0.9306 | likely_pathogenic | 0.9457 | pathogenic | -1.09 | Destabilizing | 0.89 | D | 0.759 | deleterious | None | None | None | None | N |
V/Q | 0.9658 | likely_pathogenic | 0.9658 | pathogenic | -1.767 | Destabilizing | 0.89 | D | 0.765 | deleterious | None | None | None | None | N |
V/R | 0.9635 | likely_pathogenic | 0.9604 | pathogenic | -1.389 | Destabilizing | 0.726 | D | 0.817 | deleterious | None | None | None | None | N |
V/S | 0.8957 | likely_pathogenic | 0.9116 | pathogenic | -2.297 | Highly Destabilizing | 0.726 | D | 0.692 | prob.neutral | None | None | None | None | N |
V/T | 0.7228 | likely_pathogenic | 0.7646 | pathogenic | -2.018 | Highly Destabilizing | 0.272 | N | 0.546 | neutral | None | None | None | None | N |
V/W | 0.9843 | likely_pathogenic | 0.9848 | pathogenic | -1.768 | Destabilizing | 0.968 | D | 0.758 | deleterious | None | None | None | None | N |
V/Y | 0.9553 | likely_pathogenic | 0.9568 | pathogenic | -1.385 | Destabilizing | 0.726 | D | 0.742 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.