Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15520 | 46783;46784;46785 | chr2:178619759;178619758;178619757 | chr2:179484486;179484485;179484484 |
N2AB | 13879 | 41860;41861;41862 | chr2:178619759;178619758;178619757 | chr2:179484486;179484485;179484484 |
N2A | 12952 | 39079;39080;39081 | chr2:178619759;178619758;178619757 | chr2:179484486;179484485;179484484 |
N2B | 6455 | 19588;19589;19590 | chr2:178619759;178619758;178619757 | chr2:179484486;179484485;179484484 |
Novex-1 | 6580 | 19963;19964;19965 | chr2:178619759;178619758;178619757 | chr2:179484486;179484485;179484484 |
Novex-2 | 6647 | 20164;20165;20166 | chr2:178619759;178619758;178619757 | chr2:179484486;179484485;179484484 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs2057990397 | None | 0.993 | N | 0.681 | 0.245 | 0.775140819604 | gnomAD-4.0.0 | 1.59391E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43377E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3916 | ambiguous | 0.3944 | ambiguous | -0.347 | Destabilizing | 0.977 | D | 0.477 | neutral | N | 0.494264871 | None | None | N |
V/C | 0.8476 | likely_pathogenic | 0.8902 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | N |
V/D | 0.7521 | likely_pathogenic | 0.7104 | pathogenic | -0.627 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.508486854 | None | None | N |
V/E | 0.5626 | ambiguous | 0.5366 | ambiguous | -0.736 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
V/F | 0.2591 | likely_benign | 0.2379 | benign | -0.669 | Destabilizing | 0.993 | D | 0.681 | prob.neutral | N | 0.505038171 | None | None | N |
V/G | 0.4383 | ambiguous | 0.4474 | ambiguous | -0.458 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.509150031 | None | None | N |
V/H | 0.7529 | likely_pathogenic | 0.7498 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
V/I | 0.0911 | likely_benign | 0.096 | benign | -0.194 | Destabilizing | 0.117 | N | 0.275 | neutral | N | 0.497287217 | None | None | N |
V/K | 0.4795 | ambiguous | 0.5243 | ambiguous | -0.431 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
V/L | 0.2661 | likely_benign | 0.2707 | benign | -0.194 | Destabilizing | 0.898 | D | 0.431 | neutral | N | 0.482348844 | None | None | N |
V/M | 0.2301 | likely_benign | 0.2497 | benign | -0.376 | Destabilizing | 0.995 | D | 0.623 | neutral | None | None | None | None | N |
V/N | 0.5164 | ambiguous | 0.5304 | ambiguous | -0.11 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/P | 0.6005 | likely_pathogenic | 0.5877 | pathogenic | -0.213 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
V/Q | 0.4605 | ambiguous | 0.4713 | ambiguous | -0.353 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
V/R | 0.445 | ambiguous | 0.4502 | ambiguous | 0.056 | Stabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
V/S | 0.433 | ambiguous | 0.4326 | ambiguous | -0.346 | Destabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | N |
V/T | 0.347 | ambiguous | 0.3621 | ambiguous | -0.366 | Destabilizing | 0.983 | D | 0.597 | neutral | None | None | None | None | N |
V/W | 0.9019 | likely_pathogenic | 0.9049 | pathogenic | -0.785 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
V/Y | 0.7227 | likely_pathogenic | 0.7276 | pathogenic | -0.478 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.