Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15523 | 46792;46793;46794 | chr2:178619750;178619749;178619748 | chr2:179484477;179484476;179484475 |
N2AB | 13882 | 41869;41870;41871 | chr2:178619750;178619749;178619748 | chr2:179484477;179484476;179484475 |
N2A | 12955 | 39088;39089;39090 | chr2:178619750;178619749;178619748 | chr2:179484477;179484476;179484475 |
N2B | 6458 | 19597;19598;19599 | chr2:178619750;178619749;178619748 | chr2:179484477;179484476;179484475 |
Novex-1 | 6583 | 19972;19973;19974 | chr2:178619750;178619749;178619748 | chr2:179484477;179484476;179484475 |
Novex-2 | 6650 | 20173;20174;20175 | chr2:178619750;178619749;178619748 | chr2:179484477;179484476;179484475 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1553713980 | None | 1.0 | N | 0.418 | 0.267 | 0.355034743287 | gnomAD-4.0.0 | 1.4345E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.17812E-03 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4314 | ambiguous | 0.446 | ambiguous | 0.073 | Stabilizing | 1.0 | D | 0.607 | neutral | D | 0.588732174 | None | None | N |
D/C | 0.8886 | likely_pathogenic | 0.9048 | pathogenic | 0.016 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
D/E | 0.2582 | likely_benign | 0.2694 | benign | -0.2 | Destabilizing | 1.0 | D | 0.418 | neutral | N | 0.504405894 | None | None | N |
D/F | 0.8391 | likely_pathogenic | 0.8514 | pathogenic | -0.116 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
D/G | 0.3972 | ambiguous | 0.3967 | ambiguous | -0.021 | Destabilizing | 1.0 | D | 0.549 | neutral | N | 0.510725339 | None | None | N |
D/H | 0.6214 | likely_pathogenic | 0.6102 | pathogenic | 0.415 | Stabilizing | 1.0 | D | 0.645 | neutral | D | 0.591898832 | None | None | N |
D/I | 0.6822 | likely_pathogenic | 0.6786 | pathogenic | 0.248 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
D/K | 0.609 | likely_pathogenic | 0.595 | pathogenic | 0.478 | Stabilizing | 1.0 | D | 0.601 | neutral | None | None | None | None | N |
D/L | 0.6804 | likely_pathogenic | 0.6776 | pathogenic | 0.248 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
D/M | 0.8304 | likely_pathogenic | 0.848 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
D/N | 0.2044 | likely_benign | 0.2112 | benign | 0.402 | Stabilizing | 1.0 | D | 0.589 | neutral | N | 0.505901564 | None | None | N |
D/P | 0.7061 | likely_pathogenic | 0.7386 | pathogenic | 0.208 | Stabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
D/Q | 0.5736 | likely_pathogenic | 0.5777 | pathogenic | 0.378 | Stabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
D/R | 0.6575 | likely_pathogenic | 0.6396 | pathogenic | 0.631 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
D/S | 0.295 | likely_benign | 0.2994 | benign | 0.264 | Stabilizing | 1.0 | D | 0.586 | neutral | None | None | None | None | N |
D/T | 0.5472 | ambiguous | 0.5688 | pathogenic | 0.338 | Stabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
D/V | 0.5196 | ambiguous | 0.507 | ambiguous | 0.208 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | D | 0.591898832 | None | None | N |
D/W | 0.9462 | likely_pathogenic | 0.9502 | pathogenic | -0.111 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
D/Y | 0.5402 | ambiguous | 0.5187 | ambiguous | 0.103 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | D | 0.593644374 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.