Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15524 | 46795;46796;46797 | chr2:178619747;178619746;178619745 | chr2:179484474;179484473;179484472 |
N2AB | 13883 | 41872;41873;41874 | chr2:178619747;178619746;178619745 | chr2:179484474;179484473;179484472 |
N2A | 12956 | 39091;39092;39093 | chr2:178619747;178619746;178619745 | chr2:179484474;179484473;179484472 |
N2B | 6459 | 19600;19601;19602 | chr2:178619747;178619746;178619745 | chr2:179484474;179484473;179484472 |
Novex-1 | 6584 | 19975;19976;19977 | chr2:178619747;178619746;178619745 | chr2:179484474;179484473;179484472 |
Novex-2 | 6651 | 20176;20177;20178 | chr2:178619747;178619746;178619745 | chr2:179484474;179484473;179484472 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs548285460 | None | 0.999 | D | 0.483 | 0.707 | 0.529861178392 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9242 | likely_pathogenic | 0.9327 | pathogenic | -0.341 | Destabilizing | 0.999 | D | 0.566 | neutral | None | None | None | None | N |
K/C | 0.9495 | likely_pathogenic | 0.9681 | pathogenic | -0.09 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
K/D | 0.9571 | likely_pathogenic | 0.9645 | pathogenic | -0.355 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
K/E | 0.829 | likely_pathogenic | 0.8507 | pathogenic | -0.277 | Destabilizing | 0.999 | D | 0.483 | neutral | D | 0.636164364 | None | None | N |
K/F | 0.9819 | likely_pathogenic | 0.9855 | pathogenic | -0.128 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
K/G | 0.9391 | likely_pathogenic | 0.9464 | pathogenic | -0.692 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
K/H | 0.7034 | likely_pathogenic | 0.7609 | pathogenic | -1.219 | Destabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
K/I | 0.8809 | likely_pathogenic | 0.9056 | pathogenic | 0.559 | Stabilizing | 1.0 | D | 0.663 | neutral | D | 0.635589905 | None | None | N |
K/L | 0.8808 | likely_pathogenic | 0.8987 | pathogenic | 0.559 | Stabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
K/M | 0.8355 | likely_pathogenic | 0.8663 | pathogenic | 0.604 | Stabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | N |
K/N | 0.9177 | likely_pathogenic | 0.9285 | pathogenic | -0.233 | Destabilizing | 1.0 | D | 0.647 | neutral | D | 0.595204694 | None | None | N |
K/P | 0.9787 | likely_pathogenic | 0.9788 | pathogenic | 0.289 | Stabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
K/Q | 0.5663 | likely_pathogenic | 0.6342 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.627 | neutral | D | 0.635589905 | None | None | N |
K/R | 0.1315 | likely_benign | 0.1489 | benign | -0.593 | Destabilizing | 0.999 | D | 0.487 | neutral | N | 0.518973252 | None | None | N |
K/S | 0.931 | likely_pathogenic | 0.9379 | pathogenic | -0.724 | Destabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | N |
K/T | 0.7608 | likely_pathogenic | 0.7844 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.641 | neutral | D | 0.594657441 | None | None | N |
K/V | 0.8674 | likely_pathogenic | 0.8958 | pathogenic | 0.289 | Stabilizing | 1.0 | D | 0.61 | neutral | None | None | None | None | N |
K/W | 0.9692 | likely_pathogenic | 0.9761 | pathogenic | -0.087 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
K/Y | 0.942 | likely_pathogenic | 0.9546 | pathogenic | 0.207 | Stabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.