Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15527 | 46804;46805;46806 | chr2:178619738;178619737;178619736 | chr2:179484465;179484464;179484463 |
N2AB | 13886 | 41881;41882;41883 | chr2:178619738;178619737;178619736 | chr2:179484465;179484464;179484463 |
N2A | 12959 | 39100;39101;39102 | chr2:178619738;178619737;178619736 | chr2:179484465;179484464;179484463 |
N2B | 6462 | 19609;19610;19611 | chr2:178619738;178619737;178619736 | chr2:179484465;179484464;179484463 |
Novex-1 | 6587 | 19984;19985;19986 | chr2:178619738;178619737;178619736 | chr2:179484465;179484464;179484463 |
Novex-2 | 6654 | 20185;20186;20187 | chr2:178619738;178619737;178619736 | chr2:179484465;179484464;179484463 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs1310174493 | -1.208 | 0.985 | N | 0.56 | 0.35 | 0.672949579678 | gnomAD-2.1.1 | 9.57E-05 | None | None | None | None | N | None | 3.4459E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
M/I | rs1310174493 | -1.208 | 0.985 | N | 0.56 | 0.35 | 0.672949579678 | gnomAD-3.1.2 | 1.98E-05 | None | None | None | None | N | None | 7.25E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/I | rs1310174493 | -1.208 | 0.985 | N | 0.56 | 0.35 | 0.672949579678 | gnomAD-4.0.0 | 4.3416E-06 | None | None | None | None | N | None | 6.68771E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69645E-06 | 0 | 0 |
M/K | rs77496539 | -0.925 | 0.994 | D | 0.585 | 0.623 | None | gnomAD-2.1.1 | 1.2084E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.5618E-03 | None | 0 | None | 0 | 0 | 3.32116E-04 |
M/K | rs77496539 | -0.925 | 0.994 | D | 0.585 | 0.623 | None | gnomAD-3.1.2 | 7.91E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 2.33918E-03 | None | 0 | 0 | 0 | 0 | 0 |
M/K | rs77496539 | -0.925 | 0.994 | D | 0.585 | 0.623 | None | 1000 genomes | 9.98403E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 5E-03 | 0 | None | None | None | 0 | None |
M/K | rs77496539 | -0.925 | 0.994 | D | 0.585 | 0.623 | None | gnomAD-4.0.0 | 1.47602E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.13898E-03 | None | 0 | 0 | 8.4823E-07 | 0 | 1.12165E-04 |
M/L | None | None | 0.927 | N | 0.312 | 0.317 | 0.651006993216 | gnomAD-4.0.0 | 1.59382E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77685E-05 | None | 0 | 0 | 0 | 0 | 0 |
M/R | None | None | 0.998 | N | 0.588 | 0.607 | 0.792895713981 | gnomAD-4.0.0 | 6.84686E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15993E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.7948 | likely_pathogenic | 0.8244 | pathogenic | -2.355 | Highly Destabilizing | 0.989 | D | 0.578 | neutral | None | None | None | None | N |
M/C | 0.8651 | likely_pathogenic | 0.9011 | pathogenic | -1.349 | Destabilizing | 1.0 | D | 0.601 | neutral | None | None | None | None | N |
M/D | 0.977 | likely_pathogenic | 0.9765 | pathogenic | -1.12 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
M/E | 0.8376 | likely_pathogenic | 0.8428 | pathogenic | -1.067 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
M/F | 0.4708 | ambiguous | 0.5139 | ambiguous | -1.243 | Destabilizing | 0.999 | D | 0.533 | neutral | None | None | None | None | N |
M/G | 0.9222 | likely_pathogenic | 0.9316 | pathogenic | -2.698 | Highly Destabilizing | 0.995 | D | 0.664 | neutral | None | None | None | None | N |
M/H | 0.8206 | likely_pathogenic | 0.8372 | pathogenic | -1.793 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
M/I | 0.4962 | ambiguous | 0.5243 | ambiguous | -1.433 | Destabilizing | 0.985 | D | 0.56 | neutral | N | 0.471729863 | None | None | N |
M/K | 0.4275 | ambiguous | 0.5183 | ambiguous | -1.04 | Destabilizing | 0.994 | D | 0.585 | neutral | D | 0.566355013 | None | None | N |
M/L | 0.1813 | likely_benign | 0.1942 | benign | -1.433 | Destabilizing | 0.927 | D | 0.312 | neutral | N | 0.499289699 | None | None | N |
M/N | 0.8523 | likely_pathogenic | 0.8592 | pathogenic | -0.873 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
M/P | 0.9622 | likely_pathogenic | 0.9602 | pathogenic | -1.718 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
M/Q | 0.5 | ambiguous | 0.5173 | ambiguous | -0.931 | Destabilizing | 0.999 | D | 0.522 | neutral | None | None | None | None | N |
M/R | 0.4924 | ambiguous | 0.5608 | ambiguous | -0.566 | Destabilizing | 0.998 | D | 0.588 | neutral | N | 0.50724639 | None | None | N |
M/S | 0.8518 | likely_pathogenic | 0.8563 | pathogenic | -1.491 | Destabilizing | 0.995 | D | 0.577 | neutral | None | None | None | None | N |
M/T | 0.6502 | likely_pathogenic | 0.6306 | pathogenic | -1.33 | Destabilizing | 0.994 | D | 0.593 | neutral | N | 0.51336323 | None | None | N |
M/V | 0.1712 | likely_benign | 0.182 | benign | -1.718 | Destabilizing | 0.985 | D | 0.434 | neutral | N | 0.491471961 | None | None | N |
M/W | 0.8 | likely_pathogenic | 0.8318 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
M/Y | 0.7606 | likely_pathogenic | 0.7905 | pathogenic | -1.278 | Destabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.