Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15528 | 46807;46808;46809 | chr2:178619735;178619734;178619733 | chr2:179484462;179484461;179484460 |
N2AB | 13887 | 41884;41885;41886 | chr2:178619735;178619734;178619733 | chr2:179484462;179484461;179484460 |
N2A | 12960 | 39103;39104;39105 | chr2:178619735;178619734;178619733 | chr2:179484462;179484461;179484460 |
N2B | 6463 | 19612;19613;19614 | chr2:178619735;178619734;178619733 | chr2:179484462;179484461;179484460 |
Novex-1 | 6588 | 19987;19988;19989 | chr2:178619735;178619734;178619733 | chr2:179484462;179484461;179484460 |
Novex-2 | 6655 | 20188;20189;20190 | chr2:178619735;178619734;178619733 | chr2:179484462;179484461;179484460 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/L | None | None | 0.03 | N | 0.087 | 0.217 | 0.506189230309 | gnomAD-4.0.0 | 3.18777E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72793E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.513 | ambiguous | 0.5892 | pathogenic | -0.499 | Destabilizing | 0.927 | D | 0.303 | neutral | None | None | None | None | N |
M/C | 0.7838 | likely_pathogenic | 0.8332 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.386 | neutral | None | None | None | None | N |
M/D | 0.8824 | likely_pathogenic | 0.9033 | pathogenic | 0.27 | Stabilizing | 0.999 | D | 0.473 | neutral | None | None | None | None | N |
M/E | 0.6129 | likely_pathogenic | 0.6647 | pathogenic | 0.216 | Stabilizing | 0.999 | D | 0.423 | neutral | None | None | None | None | N |
M/F | 0.3062 | likely_benign | 0.3188 | benign | -0.133 | Destabilizing | 0.969 | D | 0.345 | neutral | None | None | None | None | N |
M/G | 0.7535 | likely_pathogenic | 0.812 | pathogenic | -0.683 | Destabilizing | 0.995 | D | 0.415 | neutral | None | None | None | None | N |
M/H | 0.5771 | likely_pathogenic | 0.6145 | pathogenic | 0.124 | Stabilizing | 1.0 | D | 0.44 | neutral | None | None | None | None | N |
M/I | 0.2954 | likely_benign | 0.313 | benign | -0.109 | Destabilizing | 0.828 | D | 0.278 | neutral | N | 0.43302736 | None | None | N |
M/K | 0.3359 | likely_benign | 0.3976 | ambiguous | 0.393 | Stabilizing | 0.993 | D | 0.346 | neutral | N | 0.445855464 | None | None | N |
M/L | 0.1596 | likely_benign | 0.1736 | benign | -0.109 | Destabilizing | 0.03 | N | 0.087 | neutral | N | 0.464505007 | None | None | N |
M/N | 0.5561 | ambiguous | 0.6111 | pathogenic | 0.542 | Stabilizing | 0.999 | D | 0.458 | neutral | None | None | None | None | N |
M/P | 0.9828 | likely_pathogenic | 0.9854 | pathogenic | -0.21 | Destabilizing | 0.999 | D | 0.452 | neutral | None | None | None | None | N |
M/Q | 0.3122 | likely_benign | 0.3391 | benign | 0.36 | Stabilizing | 0.999 | D | 0.363 | neutral | None | None | None | None | N |
M/R | 0.3597 | ambiguous | 0.4035 | ambiguous | 0.885 | Stabilizing | 0.998 | D | 0.387 | neutral | N | 0.454445568 | None | None | N |
M/S | 0.5089 | ambiguous | 0.5698 | pathogenic | 0.071 | Stabilizing | 0.984 | D | 0.295 | neutral | None | None | None | None | N |
M/T | 0.3438 | ambiguous | 0.3858 | ambiguous | 0.119 | Stabilizing | 0.959 | D | 0.307 | neutral | N | 0.397177489 | None | None | N |
M/V | 0.1096 | likely_benign | 0.1225 | benign | -0.21 | Destabilizing | 0.116 | N | 0.085 | neutral | N | 0.441423793 | None | None | N |
M/W | 0.7014 | likely_pathogenic | 0.74 | pathogenic | -0.098 | Destabilizing | 1.0 | D | 0.409 | neutral | None | None | None | None | N |
M/Y | 0.6012 | likely_pathogenic | 0.6438 | pathogenic | 0.051 | Stabilizing | 0.999 | D | 0.395 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.