Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15529 | 46810;46811;46812 | chr2:178619732;178619731;178619730 | chr2:179484459;179484458;179484457 |
N2AB | 13888 | 41887;41888;41889 | chr2:178619732;178619731;178619730 | chr2:179484459;179484458;179484457 |
N2A | 12961 | 39106;39107;39108 | chr2:178619732;178619731;178619730 | chr2:179484459;179484458;179484457 |
N2B | 6464 | 19615;19616;19617 | chr2:178619732;178619731;178619730 | chr2:179484459;179484458;179484457 |
Novex-1 | 6589 | 19990;19991;19992 | chr2:178619732;178619731;178619730 | chr2:179484459;179484458;179484457 |
Novex-2 | 6656 | 20191;20192;20193 | chr2:178619732;178619731;178619730 | chr2:179484459;179484458;179484457 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.999 | D | 0.713 | 0.26 | 0.326881540566 | gnomAD-4.0.0 | 6.84693E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00033E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1375 | likely_benign | 0.1792 | benign | -0.381 | Destabilizing | 0.998 | D | 0.582 | neutral | None | None | None | None | N |
S/C | 0.2666 | likely_benign | 0.3595 | ambiguous | -0.232 | Destabilizing | 1.0 | D | 0.757 | deleterious | N | 0.510955798 | None | None | N |
S/D | 0.6163 | likely_pathogenic | 0.7218 | pathogenic | -0.111 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
S/E | 0.716 | likely_pathogenic | 0.8115 | pathogenic | -0.179 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
S/F | 0.6211 | likely_pathogenic | 0.6864 | pathogenic | -0.777 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
S/G | 0.2059 | likely_benign | 0.2864 | benign | -0.553 | Destabilizing | 0.999 | D | 0.647 | neutral | D | 0.54055012 | None | None | N |
S/H | 0.633 | likely_pathogenic | 0.6895 | pathogenic | -1.066 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
S/I | 0.4499 | ambiguous | 0.5203 | ambiguous | -0.052 | Destabilizing | 1.0 | D | 0.802 | deleterious | N | 0.502100758 | None | None | N |
S/K | 0.8676 | likely_pathogenic | 0.912 | pathogenic | -0.678 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/L | 0.3 | likely_benign | 0.3395 | benign | -0.052 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
S/M | 0.3906 | ambiguous | 0.4533 | ambiguous | 0.191 | Stabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
S/N | 0.2541 | likely_benign | 0.34 | ambiguous | -0.385 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | D | 0.536114762 | None | None | N |
S/P | 0.7782 | likely_pathogenic | 0.845 | pathogenic | -0.13 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
S/Q | 0.6827 | likely_pathogenic | 0.752 | pathogenic | -0.606 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
S/R | 0.8257 | likely_pathogenic | 0.8725 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.494406951 | None | None | N |
S/T | 0.118 | likely_benign | 0.1423 | benign | -0.433 | Destabilizing | 0.999 | D | 0.662 | neutral | N | 0.503917449 | None | None | N |
S/V | 0.3673 | ambiguous | 0.4288 | ambiguous | -0.13 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
S/W | 0.7068 | likely_pathogenic | 0.7302 | pathogenic | -0.801 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
S/Y | 0.5234 | ambiguous | 0.5683 | pathogenic | -0.54 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.