Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15536 | 46831;46832;46833 | chr2:178619711;178619710;178619709 | chr2:179484438;179484437;179484436 |
N2AB | 13895 | 41908;41909;41910 | chr2:178619711;178619710;178619709 | chr2:179484438;179484437;179484436 |
N2A | 12968 | 39127;39128;39129 | chr2:178619711;178619710;178619709 | chr2:179484438;179484437;179484436 |
N2B | 6471 | 19636;19637;19638 | chr2:178619711;178619710;178619709 | chr2:179484438;179484437;179484436 |
Novex-1 | 6596 | 20011;20012;20013 | chr2:178619711;178619710;178619709 | chr2:179484438;179484437;179484436 |
Novex-2 | 6663 | 20212;20213;20214 | chr2:178619711;178619710;178619709 | chr2:179484438;179484437;179484436 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | rs775884428 | -2.643 | 1.0 | D | 0.912 | 0.896 | 0.892716174367 | gnomAD-2.1.1 | 2.42E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.96181E-04 | None | 0 | 0 | 0 |
L/Q | rs775884428 | -2.643 | 1.0 | D | 0.912 | 0.896 | 0.892716174367 | gnomAD-4.0.0 | 8.9016E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.39221E-04 | 1.65837E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9856 | likely_pathogenic | 0.9886 | pathogenic | -2.302 | Highly Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
L/C | 0.9519 | likely_pathogenic | 0.9713 | pathogenic | -1.513 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9999 | pathogenic | -3.191 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/E | 0.9987 | likely_pathogenic | 0.9987 | pathogenic | -2.876 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/F | 0.6371 | likely_pathogenic | 0.7461 | pathogenic | -1.442 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
L/G | 0.9965 | likely_pathogenic | 0.9975 | pathogenic | -2.875 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/H | 0.9943 | likely_pathogenic | 0.9942 | pathogenic | -2.786 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
L/I | 0.3984 | ambiguous | 0.4472 | ambiguous | -0.571 | Destabilizing | 0.999 | D | 0.641 | neutral | D | 0.643873549 | None | None | N |
L/K | 0.9963 | likely_pathogenic | 0.9963 | pathogenic | -1.748 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/M | 0.398 | ambiguous | 0.4287 | ambiguous | -0.802 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/N | 0.9985 | likely_pathogenic | 0.9985 | pathogenic | -2.508 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/P | 0.9992 | likely_pathogenic | 0.9993 | pathogenic | -1.141 | Destabilizing | 1.0 | D | 0.911 | deleterious | D | 0.642931647 | None | None | N |
L/Q | 0.9919 | likely_pathogenic | 0.9909 | pathogenic | -2.119 | Highly Destabilizing | 1.0 | D | 0.912 | deleterious | D | 0.642931647 | None | None | N |
L/R | 0.9923 | likely_pathogenic | 0.9933 | pathogenic | -1.991 | Destabilizing | 1.0 | D | 0.906 | deleterious | D | 0.642931647 | None | None | N |
L/S | 0.9985 | likely_pathogenic | 0.9985 | pathogenic | -2.945 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
L/T | 0.9954 | likely_pathogenic | 0.9955 | pathogenic | -2.466 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
L/V | 0.5753 | likely_pathogenic | 0.6496 | pathogenic | -1.141 | Destabilizing | 0.999 | D | 0.641 | neutral | D | 0.64290376 | None | None | N |
L/W | 0.9706 | likely_pathogenic | 0.9768 | pathogenic | -1.849 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/Y | 0.9709 | likely_pathogenic | 0.9783 | pathogenic | -1.608 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.