Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15551 | 46876;46877;46878 | chr2:178619666;178619665;178619664 | chr2:179484393;179484392;179484391 |
N2AB | 13910 | 41953;41954;41955 | chr2:178619666;178619665;178619664 | chr2:179484393;179484392;179484391 |
N2A | 12983 | 39172;39173;39174 | chr2:178619666;178619665;178619664 | chr2:179484393;179484392;179484391 |
N2B | 6486 | 19681;19682;19683 | chr2:178619666;178619665;178619664 | chr2:179484393;179484392;179484391 |
Novex-1 | 6611 | 20056;20057;20058 | chr2:178619666;178619665;178619664 | chr2:179484393;179484392;179484391 |
Novex-2 | 6678 | 20257;20258;20259 | chr2:178619666;178619665;178619664 | chr2:179484393;179484392;179484391 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.015 | N | 0.37 | 0.344 | 0.411665641125 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
F/Y | rs1329504399 | -1.403 | 0.986 | D | 0.619 | 0.521 | 0.652270480338 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
F/Y | rs1329504399 | -1.403 | 0.986 | D | 0.619 | 0.521 | 0.652270480338 | gnomAD-4.0.0 | 1.59486E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86503E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9861 | likely_pathogenic | 0.9809 | pathogenic | -2.849 | Highly Destabilizing | 0.863 | D | 0.709 | prob.delet. | None | None | None | None | N |
F/C | 0.8314 | likely_pathogenic | 0.8057 | pathogenic | -1.627 | Destabilizing | 0.999 | D | 0.807 | deleterious | N | 0.409342032 | None | None | N |
F/D | 0.9996 | likely_pathogenic | 0.9995 | pathogenic | -3.671 | Highly Destabilizing | 0.997 | D | 0.811 | deleterious | None | None | None | None | N |
F/E | 0.9993 | likely_pathogenic | 0.999 | pathogenic | -3.457 | Highly Destabilizing | 0.997 | D | 0.803 | deleterious | None | None | None | None | N |
F/G | 0.9961 | likely_pathogenic | 0.995 | pathogenic | -3.269 | Highly Destabilizing | 0.99 | D | 0.786 | deleterious | None | None | None | None | N |
F/H | 0.9957 | likely_pathogenic | 0.9946 | pathogenic | -1.994 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
F/I | 0.529 | ambiguous | 0.4764 | ambiguous | -1.451 | Destabilizing | 0.061 | N | 0.409 | neutral | N | 0.424532594 | None | None | N |
F/K | 0.9992 | likely_pathogenic | 0.9987 | pathogenic | -2.192 | Highly Destabilizing | 0.997 | D | 0.802 | deleterious | None | None | None | None | N |
F/L | 0.9318 | likely_pathogenic | 0.9236 | pathogenic | -1.451 | Destabilizing | 0.015 | N | 0.37 | neutral | N | 0.514838817 | None | None | N |
F/M | 0.8162 | likely_pathogenic | 0.771 | pathogenic | -1.066 | Destabilizing | 0.982 | D | 0.679 | prob.neutral | None | None | None | None | N |
F/N | 0.9981 | likely_pathogenic | 0.9973 | pathogenic | -2.796 | Highly Destabilizing | 0.997 | D | 0.824 | deleterious | None | None | None | None | N |
F/P | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -1.933 | Destabilizing | 0.997 | D | 0.824 | deleterious | None | None | None | None | N |
F/Q | 0.9983 | likely_pathogenic | 0.9975 | pathogenic | -2.714 | Highly Destabilizing | 0.997 | D | 0.825 | deleterious | None | None | None | None | N |
F/R | 0.9971 | likely_pathogenic | 0.9962 | pathogenic | -1.828 | Destabilizing | 0.997 | D | 0.822 | deleterious | None | None | None | None | N |
F/S | 0.9967 | likely_pathogenic | 0.9959 | pathogenic | -3.269 | Highly Destabilizing | 0.959 | D | 0.754 | deleterious | D | 0.541157292 | None | None | N |
F/T | 0.9957 | likely_pathogenic | 0.9932 | pathogenic | -2.947 | Highly Destabilizing | 0.939 | D | 0.74 | deleterious | None | None | None | None | N |
F/V | 0.6027 | likely_pathogenic | 0.5827 | pathogenic | -1.933 | Destabilizing | 0.061 | N | 0.539 | neutral | N | 0.505016019 | None | None | N |
F/W | 0.9473 | likely_pathogenic | 0.9463 | pathogenic | -0.606 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
F/Y | 0.6991 | likely_pathogenic | 0.7091 | pathogenic | -1.013 | Destabilizing | 0.986 | D | 0.619 | neutral | D | 0.541157292 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.