Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15557 | 46894;46895;46896 | chr2:178619648;178619647;178619646 | chr2:179484375;179484374;179484373 |
N2AB | 13916 | 41971;41972;41973 | chr2:178619648;178619647;178619646 | chr2:179484375;179484374;179484373 |
N2A | 12989 | 39190;39191;39192 | chr2:178619648;178619647;178619646 | chr2:179484375;179484374;179484373 |
N2B | 6492 | 19699;19700;19701 | chr2:178619648;178619647;178619646 | chr2:179484375;179484374;179484373 |
Novex-1 | 6617 | 20074;20075;20076 | chr2:178619648;178619647;178619646 | chr2:179484375;179484374;179484373 |
Novex-2 | 6684 | 20275;20276;20277 | chr2:178619648;178619647;178619646 | chr2:179484375;179484374;179484373 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.001 | N | 0.223 | 0.097 | 0.225902525712 | gnomAD-4.0.0 | 1.59527E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03306E-05 |
E/K | None | None | 0.549 | N | 0.581 | 0.321 | 0.361958692863 | gnomAD-4.0.0 | 6.84954E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00221E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3063 | likely_benign | 0.2899 | benign | -0.645 | Destabilizing | 0.201 | N | 0.556 | neutral | N | 0.459285523 | None | None | N |
E/C | 0.9473 | likely_pathogenic | 0.9404 | pathogenic | -0.395 | Destabilizing | 0.992 | D | 0.666 | neutral | None | None | None | None | N |
E/D | 0.2762 | likely_benign | 0.2595 | benign | -0.699 | Destabilizing | 0.001 | N | 0.223 | neutral | N | 0.443044416 | None | None | N |
E/F | 0.9073 | likely_pathogenic | 0.896 | pathogenic | -0.079 | Destabilizing | 0.85 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/G | 0.537 | ambiguous | 0.483 | ambiguous | -0.945 | Destabilizing | 0.549 | D | 0.637 | neutral | N | 0.49943991 | None | None | N |
E/H | 0.8085 | likely_pathogenic | 0.7663 | pathogenic | 0.012 | Stabilizing | 0.972 | D | 0.608 | neutral | None | None | None | None | N |
E/I | 0.597 | likely_pathogenic | 0.6028 | pathogenic | 0.151 | Stabilizing | 0.217 | N | 0.651 | neutral | None | None | None | None | N |
E/K | 0.6194 | likely_pathogenic | 0.5599 | ambiguous | -0.116 | Destabilizing | 0.549 | D | 0.581 | neutral | N | 0.394887498 | None | None | N |
E/L | 0.7491 | likely_pathogenic | 0.7444 | pathogenic | 0.151 | Stabilizing | 0.447 | N | 0.646 | neutral | None | None | None | None | N |
E/M | 0.6873 | likely_pathogenic | 0.697 | pathogenic | 0.276 | Stabilizing | 0.955 | D | 0.664 | neutral | None | None | None | None | N |
E/N | 0.6212 | likely_pathogenic | 0.5838 | pathogenic | -0.687 | Destabilizing | 0.617 | D | 0.589 | neutral | None | None | None | None | N |
E/P | 0.9521 | likely_pathogenic | 0.9263 | pathogenic | -0.094 | Destabilizing | 0.972 | D | 0.635 | neutral | None | None | None | None | N |
E/Q | 0.3616 | ambiguous | 0.3353 | benign | -0.586 | Destabilizing | 0.712 | D | 0.579 | neutral | N | 0.488585177 | None | None | N |
E/R | 0.7631 | likely_pathogenic | 0.71 | pathogenic | 0.25 | Stabilizing | 0.92 | D | 0.616 | neutral | None | None | None | None | N |
E/S | 0.4371 | ambiguous | 0.3904 | ambiguous | -0.884 | Destabilizing | 0.617 | D | 0.564 | neutral | None | None | None | None | N |
E/T | 0.4001 | ambiguous | 0.3719 | ambiguous | -0.632 | Destabilizing | 0.617 | D | 0.595 | neutral | None | None | None | None | N |
E/V | 0.3355 | likely_benign | 0.3412 | ambiguous | -0.094 | Destabilizing | 0.004 | N | 0.47 | neutral | N | 0.47350241 | None | None | N |
E/W | 0.9647 | likely_pathogenic | 0.9587 | pathogenic | 0.211 | Stabilizing | 0.992 | D | 0.661 | neutral | None | None | None | None | N |
E/Y | 0.841 | likely_pathogenic | 0.8361 | pathogenic | 0.191 | Stabilizing | 0.92 | D | 0.684 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.