Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15560 | 46903;46904;46905 | chr2:178619639;178619638;178619637 | chr2:179484366;179484365;179484364 |
N2AB | 13919 | 41980;41981;41982 | chr2:178619639;178619638;178619637 | chr2:179484366;179484365;179484364 |
N2A | 12992 | 39199;39200;39201 | chr2:178619639;178619638;178619637 | chr2:179484366;179484365;179484364 |
N2B | 6495 | 19708;19709;19710 | chr2:178619639;178619638;178619637 | chr2:179484366;179484365;179484364 |
Novex-1 | 6620 | 20083;20084;20085 | chr2:178619639;178619638;178619637 | chr2:179484366;179484365;179484364 |
Novex-2 | 6687 | 20284;20285;20286 | chr2:178619639;178619638;178619637 | chr2:179484366;179484365;179484364 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | rs2057972776 | None | 1.0 | D | 0.559 | 0.45 | 0.483741690565 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.43E-05 | 0 | 0 | 0 | 0 |
A/G | rs2057972776 | None | 1.0 | D | 0.559 | 0.45 | 0.483741690565 | gnomAD-4.0.0 | 6.58467E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.42863E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7124 | likely_pathogenic | 0.6474 | pathogenic | -1.019 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
A/D | 0.9927 | likely_pathogenic | 0.9923 | pathogenic | -2.222 | Highly Destabilizing | 1.0 | D | 0.822 | deleterious | D | 0.642317686 | None | None | N |
A/E | 0.9899 | likely_pathogenic | 0.9889 | pathogenic | -2.047 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
A/F | 0.9761 | likely_pathogenic | 0.9668 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
A/G | 0.249 | likely_benign | 0.2337 | benign | -1.587 | Destabilizing | 1.0 | D | 0.559 | neutral | D | 0.602366369 | None | None | N |
A/H | 0.9929 | likely_pathogenic | 0.9903 | pathogenic | -2.016 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
A/I | 0.953 | likely_pathogenic | 0.9408 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
A/K | 0.9959 | likely_pathogenic | 0.9948 | pathogenic | -1.31 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
A/L | 0.908 | likely_pathogenic | 0.883 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
A/M | 0.9374 | likely_pathogenic | 0.92 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
A/N | 0.9832 | likely_pathogenic | 0.9785 | pathogenic | -1.499 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
A/P | 0.9941 | likely_pathogenic | 0.9951 | pathogenic | -0.25 | Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.642317686 | None | None | N |
A/Q | 0.9785 | likely_pathogenic | 0.9731 | pathogenic | -1.347 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
A/R | 0.9859 | likely_pathogenic | 0.9821 | pathogenic | -1.323 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
A/S | 0.3284 | likely_benign | 0.307 | benign | -1.919 | Destabilizing | 1.0 | D | 0.565 | neutral | D | 0.59848087 | None | None | N |
A/T | 0.6558 | likely_pathogenic | 0.6142 | pathogenic | -1.622 | Destabilizing | 1.0 | D | 0.663 | neutral | D | 0.594898944 | None | None | N |
A/V | 0.7584 | likely_pathogenic | 0.7242 | pathogenic | -0.25 | Destabilizing | 1.0 | D | 0.572 | neutral | D | 0.640735517 | None | None | N |
A/W | 0.9977 | likely_pathogenic | 0.9969 | pathogenic | -1.529 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
A/Y | 0.9912 | likely_pathogenic | 0.9881 | pathogenic | -0.963 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.