Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15569 | 46930;46931;46932 | chr2:178618845;178618844;178618843 | chr2:179483572;179483571;179483570 |
N2AB | 13928 | 42007;42008;42009 | chr2:178618845;178618844;178618843 | chr2:179483572;179483571;179483570 |
N2A | 13001 | 39226;39227;39228 | chr2:178618845;178618844;178618843 | chr2:179483572;179483571;179483570 |
N2B | 6504 | 19735;19736;19737 | chr2:178618845;178618844;178618843 | chr2:179483572;179483571;179483570 |
Novex-1 | 6629 | 20110;20111;20112 | chr2:178618845;178618844;178618843 | chr2:179483572;179483571;179483570 |
Novex-2 | 6696 | 20311;20312;20313 | chr2:178618845;178618844;178618843 | chr2:179483572;179483571;179483570 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs777791019 | 0.318 | 0.454 | N | 0.406 | 0.186 | 0.30212335484 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.31E-05 | None | 0 | 0 | 0 |
K/E | rs777791019 | 0.318 | 0.454 | N | 0.406 | 0.186 | 0.30212335484 | gnomAD-4.0.0 | 1.60247E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44346E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2265 | likely_benign | 0.2851 | benign | -0.135 | Destabilizing | 0.688 | D | 0.407 | neutral | None | None | None | None | N |
K/C | 0.5319 | ambiguous | 0.6702 | pathogenic | -0.246 | Destabilizing | 0.998 | D | 0.511 | neutral | None | None | None | None | N |
K/D | 0.5298 | ambiguous | 0.5956 | pathogenic | -0.033 | Destabilizing | 0.842 | D | 0.483 | neutral | None | None | None | None | N |
K/E | 0.1474 | likely_benign | 0.1809 | benign | 0.034 | Stabilizing | 0.454 | N | 0.406 | neutral | N | 0.510047206 | None | None | N |
K/F | 0.5629 | ambiguous | 0.6878 | pathogenic | -0.003 | Destabilizing | 0.991 | D | 0.517 | neutral | None | None | None | None | N |
K/G | 0.3789 | ambiguous | 0.4957 | ambiguous | -0.426 | Destabilizing | 0.915 | D | 0.445 | neutral | None | None | None | None | N |
K/H | 0.2264 | likely_benign | 0.2828 | benign | -0.666 | Destabilizing | 0.974 | D | 0.469 | neutral | None | None | None | None | N |
K/I | 0.2002 | likely_benign | 0.2331 | benign | 0.583 | Stabilizing | 0.934 | D | 0.533 | neutral | N | 0.515428769 | None | None | N |
K/L | 0.2473 | likely_benign | 0.3274 | benign | 0.583 | Stabilizing | 0.842 | D | 0.441 | neutral | None | None | None | None | N |
K/M | 0.1724 | likely_benign | 0.2171 | benign | 0.202 | Stabilizing | 0.991 | D | 0.469 | neutral | None | None | None | None | N |
K/N | 0.2809 | likely_benign | 0.3317 | benign | -0.039 | Destabilizing | 0.801 | D | 0.407 | neutral | N | 0.514190304 | None | None | N |
K/P | 0.8992 | likely_pathogenic | 0.931 | pathogenic | 0.373 | Stabilizing | 0.991 | D | 0.501 | neutral | None | None | None | None | N |
K/Q | 0.1011 | likely_benign | 0.1218 | benign | -0.098 | Destabilizing | 0.136 | N | 0.146 | neutral | N | 0.501537122 | None | None | N |
K/R | 0.0721 | likely_benign | 0.0877 | benign | -0.281 | Destabilizing | 0.005 | N | 0.127 | neutral | N | 0.486784434 | None | None | N |
K/S | 0.2701 | likely_benign | 0.3316 | benign | -0.515 | Destabilizing | 0.525 | D | 0.365 | neutral | None | None | None | None | N |
K/T | 0.1049 | likely_benign | 0.1162 | benign | -0.272 | Destabilizing | 0.051 | N | 0.321 | neutral | N | 0.502224315 | None | None | N |
K/V | 0.1731 | likely_benign | 0.2006 | benign | 0.373 | Stabilizing | 0.842 | D | 0.486 | neutral | None | None | None | None | N |
K/W | 0.6422 | likely_pathogenic | 0.787 | pathogenic | -0.005 | Destabilizing | 0.998 | D | 0.547 | neutral | None | None | None | None | N |
K/Y | 0.4817 | ambiguous | 0.6138 | pathogenic | 0.297 | Stabilizing | 0.991 | D | 0.518 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.