Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15573 | 46942;46943;46944 | chr2:178618833;178618832;178618831 | chr2:179483560;179483559;179483558 |
N2AB | 13932 | 42019;42020;42021 | chr2:178618833;178618832;178618831 | chr2:179483560;179483559;179483558 |
N2A | 13005 | 39238;39239;39240 | chr2:178618833;178618832;178618831 | chr2:179483560;179483559;179483558 |
N2B | 6508 | 19747;19748;19749 | chr2:178618833;178618832;178618831 | chr2:179483560;179483559;179483558 |
Novex-1 | 6633 | 20122;20123;20124 | chr2:178618833;178618832;178618831 | chr2:179483560;179483559;179483558 |
Novex-2 | 6700 | 20323;20324;20325 | chr2:178618833;178618832;178618831 | chr2:179483560;179483559;179483558 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | None | N | 0.121 | 0.077 | 0.28722502521 | gnomAD-4.0.0 | 1.60088E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44105E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3197 | likely_benign | 0.4113 | ambiguous | -0.774 | Destabilizing | 0.628 | D | 0.525 | neutral | None | None | None | None | N |
A/D | 0.1618 | likely_benign | 0.2187 | benign | -0.474 | Destabilizing | None | N | 0.287 | neutral | N | 0.443607298 | None | None | N |
A/E | 0.1646 | likely_benign | 0.2032 | benign | -0.63 | Destabilizing | 0.016 | N | 0.454 | neutral | None | None | None | None | N |
A/F | 0.237 | likely_benign | 0.3035 | benign | -0.898 | Destabilizing | 0.214 | N | 0.511 | neutral | None | None | None | None | N |
A/G | 0.0797 | likely_benign | 0.0767 | benign | -0.174 | Destabilizing | None | N | 0.099 | neutral | N | 0.443607298 | None | None | N |
A/H | 0.3167 | likely_benign | 0.379 | ambiguous | -0.245 | Destabilizing | 0.628 | D | 0.509 | neutral | None | None | None | None | N |
A/I | 0.1592 | likely_benign | 0.2229 | benign | -0.363 | Destabilizing | 0.038 | N | 0.464 | neutral | None | None | None | None | N |
A/K | 0.2482 | likely_benign | 0.2808 | benign | -0.481 | Destabilizing | 0.072 | N | 0.471 | neutral | None | None | None | None | N |
A/L | 0.117 | likely_benign | 0.1443 | benign | -0.363 | Destabilizing | None | N | 0.216 | neutral | None | None | None | None | N |
A/M | 0.1557 | likely_benign | 0.2047 | benign | -0.474 | Destabilizing | 0.214 | N | 0.522 | neutral | None | None | None | None | N |
A/N | 0.1433 | likely_benign | 0.1798 | benign | -0.187 | Destabilizing | 0.038 | N | 0.466 | neutral | None | None | None | None | N |
A/P | 0.1307 | likely_benign | 0.167 | benign | -0.274 | Destabilizing | 0.106 | N | 0.53 | neutral | N | 0.484499307 | None | None | N |
A/Q | 0.2142 | likely_benign | 0.2409 | benign | -0.456 | Destabilizing | 0.214 | N | 0.543 | neutral | None | None | None | None | N |
A/R | 0.2398 | likely_benign | 0.2717 | benign | -0.073 | Destabilizing | 0.072 | N | 0.545 | neutral | None | None | None | None | N |
A/S | 0.0774 | likely_benign | 0.0827 | benign | -0.351 | Destabilizing | None | N | 0.154 | neutral | N | 0.485155052 | None | None | N |
A/T | 0.0707 | likely_benign | 0.0808 | benign | -0.436 | Destabilizing | None | N | 0.121 | neutral | N | 0.442889034 | None | None | N |
A/V | 0.0981 | likely_benign | 0.1232 | benign | -0.274 | Destabilizing | 0.012 | N | 0.377 | neutral | N | 0.484623344 | None | None | N |
A/W | 0.4768 | ambiguous | 0.5668 | pathogenic | -1.013 | Destabilizing | 0.864 | D | 0.559 | neutral | None | None | None | None | N |
A/Y | 0.3052 | likely_benign | 0.3989 | ambiguous | -0.68 | Destabilizing | 0.628 | D | 0.517 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.