Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15583 | 46972;46973;46974 | chr2:178618803;178618802;178618801 | chr2:179483530;179483529;179483528 |
N2AB | 13942 | 42049;42050;42051 | chr2:178618803;178618802;178618801 | chr2:179483530;179483529;179483528 |
N2A | 13015 | 39268;39269;39270 | chr2:178618803;178618802;178618801 | chr2:179483530;179483529;179483528 |
N2B | 6518 | 19777;19778;19779 | chr2:178618803;178618802;178618801 | chr2:179483530;179483529;179483528 |
Novex-1 | 6643 | 20152;20153;20154 | chr2:178618803;178618802;178618801 | chr2:179483530;179483529;179483528 |
Novex-2 | 6710 | 20353;20354;20355 | chr2:178618803;178618802;178618801 | chr2:179483530;179483529;179483528 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1460478978 | 0.207 | 0.22 | N | 0.419 | 0.115 | 0.0716867268079 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 6.60502E-04 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1460478978 | 0.207 | 0.22 | N | 0.419 | 0.115 | 0.0716867268079 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.94856E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs1460478978 | 0.207 | 0.22 | N | 0.419 | 0.115 | 0.0716867268079 | gnomAD-4.0.0 | 6.58302E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.94856E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4498 | ambiguous | 0.5951 | pathogenic | -0.1 | Destabilizing | 0.157 | N | 0.487 | neutral | None | None | None | None | I |
K/C | 0.6516 | likely_pathogenic | 0.8299 | pathogenic | -0.13 | Destabilizing | 0.968 | D | 0.661 | neutral | None | None | None | None | I |
K/D | 0.6315 | likely_pathogenic | 0.7591 | pathogenic | 0.068 | Stabilizing | 0.272 | N | 0.463 | neutral | None | None | None | None | I |
K/E | 0.253 | likely_benign | 0.336 | benign | 0.11 | Stabilizing | 0.055 | N | 0.502 | neutral | N | 0.437799751 | None | None | I |
K/F | 0.7362 | likely_pathogenic | 0.8397 | pathogenic | -0.054 | Destabilizing | 0.89 | D | 0.613 | neutral | None | None | None | None | I |
K/G | 0.5273 | ambiguous | 0.6904 | pathogenic | -0.378 | Destabilizing | 0.272 | N | 0.477 | neutral | None | None | None | None | I |
K/H | 0.283 | likely_benign | 0.3885 | ambiguous | -0.725 | Destabilizing | 0.567 | D | 0.452 | neutral | None | None | None | None | I |
K/I | 0.438 | ambiguous | 0.5717 | pathogenic | 0.575 | Stabilizing | 0.726 | D | 0.603 | neutral | None | None | None | None | I |
K/L | 0.347 | ambiguous | 0.5083 | ambiguous | 0.575 | Stabilizing | 0.272 | N | 0.477 | neutral | None | None | None | None | I |
K/M | 0.2808 | likely_benign | 0.4168 | ambiguous | 0.373 | Stabilizing | 0.667 | D | 0.453 | neutral | N | 0.45537372 | None | None | I |
K/N | 0.384 | ambiguous | 0.4944 | ambiguous | 0.127 | Stabilizing | 0.22 | N | 0.419 | neutral | N | 0.431734083 | None | None | I |
K/P | 0.9065 | likely_pathogenic | 0.9667 | pathogenic | 0.38 | Stabilizing | 0.726 | D | 0.423 | neutral | None | None | None | None | I |
K/Q | 0.132 | likely_benign | 0.1586 | benign | -0.015 | Destabilizing | 0.001 | N | 0.209 | neutral | N | 0.436825468 | None | None | I |
K/R | 0.1078 | likely_benign | 0.1363 | benign | -0.232 | Destabilizing | 0.124 | N | 0.438 | neutral | N | 0.452173473 | None | None | I |
K/S | 0.4248 | ambiguous | 0.566 | pathogenic | -0.397 | Destabilizing | 0.157 | N | 0.426 | neutral | None | None | None | None | I |
K/T | 0.2654 | likely_benign | 0.3731 | ambiguous | -0.186 | Destabilizing | 0.22 | N | 0.437 | neutral | N | 0.450707854 | None | None | I |
K/V | 0.3989 | ambiguous | 0.5546 | ambiguous | 0.38 | Stabilizing | 0.567 | D | 0.449 | neutral | None | None | None | None | I |
K/W | 0.776 | likely_pathogenic | 0.8963 | pathogenic | -0.017 | Destabilizing | 0.968 | D | 0.689 | prob.neutral | None | None | None | None | I |
K/Y | 0.5765 | likely_pathogenic | 0.7281 | pathogenic | 0.295 | Stabilizing | 0.726 | D | 0.557 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.