Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15586 | 46981;46982;46983 | chr2:178618794;178618793;178618792 | chr2:179483521;179483520;179483519 |
N2AB | 13945 | 42058;42059;42060 | chr2:178618794;178618793;178618792 | chr2:179483521;179483520;179483519 |
N2A | 13018 | 39277;39278;39279 | chr2:178618794;178618793;178618792 | chr2:179483521;179483520;179483519 |
N2B | 6521 | 19786;19787;19788 | chr2:178618794;178618793;178618792 | chr2:179483521;179483520;179483519 |
Novex-1 | 6646 | 20161;20162;20163 | chr2:178618794;178618793;178618792 | chr2:179483521;179483520;179483519 |
Novex-2 | 6713 | 20362;20363;20364 | chr2:178618794;178618793;178618792 | chr2:179483521;179483520;179483519 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs764917649 | -0.767 | 0.98 | N | 0.512 | 0.138 | 0.143124449307 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.67504E-04 |
T/S | rs764917649 | -0.767 | 0.98 | N | 0.512 | 0.138 | 0.143124449307 | gnomAD-4.0.0 | 1.59713E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.04044E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1032 | likely_benign | 0.115 | benign | -0.622 | Destabilizing | 0.91 | D | 0.479 | neutral | N | 0.460211243 | None | None | N |
T/C | 0.4124 | ambiguous | 0.4225 | ambiguous | -0.437 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
T/D | 0.403 | ambiguous | 0.4204 | ambiguous | 0.149 | Stabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
T/E | 0.2516 | likely_benign | 0.278 | benign | 0.144 | Stabilizing | 0.999 | D | 0.64 | neutral | None | None | None | None | N |
T/F | 0.2297 | likely_benign | 0.27 | benign | -0.73 | Destabilizing | 0.996 | D | 0.714 | prob.delet. | None | None | None | None | N |
T/G | 0.3413 | ambiguous | 0.3808 | ambiguous | -0.866 | Destabilizing | 0.995 | D | 0.617 | neutral | None | None | None | None | N |
T/H | 0.246 | likely_benign | 0.2655 | benign | -1.076 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
T/I | 0.1282 | likely_benign | 0.1484 | benign | -0.072 | Destabilizing | 0.925 | D | 0.572 | neutral | N | 0.457543516 | None | None | N |
T/K | 0.2172 | likely_benign | 0.2383 | benign | -0.577 | Destabilizing | 0.998 | D | 0.642 | neutral | N | 0.456446007 | None | None | N |
T/L | 0.0966 | likely_benign | 0.1073 | benign | -0.072 | Destabilizing | 0.871 | D | 0.545 | neutral | None | None | None | None | N |
T/M | 0.0905 | likely_benign | 0.1039 | benign | 0.007 | Stabilizing | 0.996 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/N | 0.134 | likely_benign | 0.1437 | benign | -0.5 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | N |
T/P | 0.3321 | likely_benign | 0.3364 | benign | -0.223 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | N | 0.462024896 | None | None | N |
T/Q | 0.2032 | likely_benign | 0.2223 | benign | -0.613 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/R | 0.1907 | likely_benign | 0.2148 | benign | -0.372 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | N | 0.452189505 | None | None | N |
T/S | 0.1261 | likely_benign | 0.1459 | benign | -0.789 | Destabilizing | 0.98 | D | 0.512 | neutral | N | 0.457228874 | None | None | N |
T/V | 0.1046 | likely_benign | 0.1184 | benign | -0.223 | Destabilizing | 0.155 | N | 0.245 | neutral | None | None | None | None | N |
T/W | 0.5693 | likely_pathogenic | 0.6032 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/Y | 0.258 | likely_benign | 0.2687 | benign | -0.445 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.