Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15594 | 47005;47006;47007 | chr2:178618770;178618769;178618768 | chr2:179483497;179483496;179483495 |
N2AB | 13953 | 42082;42083;42084 | chr2:178618770;178618769;178618768 | chr2:179483497;179483496;179483495 |
N2A | 13026 | 39301;39302;39303 | chr2:178618770;178618769;178618768 | chr2:179483497;179483496;179483495 |
N2B | 6529 | 19810;19811;19812 | chr2:178618770;178618769;178618768 | chr2:179483497;179483496;179483495 |
Novex-1 | 6654 | 20185;20186;20187 | chr2:178618770;178618769;178618768 | chr2:179483497;179483496;179483495 |
Novex-2 | 6721 | 20386;20387;20388 | chr2:178618770;178618769;178618768 | chr2:179483497;179483496;179483495 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs727504196 | 0.625 | 0.908 | N | 0.644 | 0.432 | 0.473458370588 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.49E-05 | 0 |
Y/H | rs727504196 | 0.625 | 0.908 | N | 0.644 | 0.432 | 0.473458370588 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/H | rs727504196 | 0.625 | 0.908 | N | 0.644 | 0.432 | 0.473458370588 | gnomAD-4.0.0 | 2.35807E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.22379E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6845 | likely_pathogenic | 0.7116 | pathogenic | -0.191 | Destabilizing | 0.648 | D | 0.582 | neutral | None | None | None | None | N |
Y/C | 0.291 | likely_benign | 0.3538 | ambiguous | 0.264 | Stabilizing | 0.991 | D | 0.704 | prob.neutral | N | 0.507158356 | None | None | N |
Y/D | 0.7035 | likely_pathogenic | 0.7196 | pathogenic | 0.647 | Stabilizing | 0.968 | D | 0.672 | neutral | N | 0.502594509 | None | None | N |
Y/E | 0.874 | likely_pathogenic | 0.8791 | pathogenic | 0.612 | Stabilizing | 0.929 | D | 0.642 | neutral | None | None | None | None | N |
Y/F | 0.0997 | likely_benign | 0.1046 | benign | -0.184 | Destabilizing | 0.004 | N | 0.383 | neutral | N | 0.499072437 | None | None | N |
Y/G | 0.7859 | likely_pathogenic | 0.8064 | pathogenic | -0.326 | Destabilizing | 0.929 | D | 0.641 | neutral | None | None | None | None | N |
Y/H | 0.3017 | likely_benign | 0.3419 | ambiguous | 0.39 | Stabilizing | 0.908 | D | 0.644 | neutral | N | 0.50695778 | None | None | N |
Y/I | 0.5519 | ambiguous | 0.6028 | pathogenic | 0.118 | Stabilizing | 0.764 | D | 0.616 | neutral | None | None | None | None | N |
Y/K | 0.8134 | likely_pathogenic | 0.8147 | pathogenic | 0.383 | Stabilizing | 0.929 | D | 0.643 | neutral | None | None | None | None | N |
Y/L | 0.5891 | likely_pathogenic | 0.6202 | pathogenic | 0.118 | Stabilizing | 0.48 | N | 0.621 | neutral | None | None | None | None | N |
Y/M | 0.7436 | likely_pathogenic | 0.76 | pathogenic | -0.003 | Destabilizing | 0.98 | D | 0.662 | neutral | None | None | None | None | N |
Y/N | 0.3967 | ambiguous | 0.4063 | ambiguous | 0.173 | Stabilizing | 0.968 | D | 0.665 | neutral | N | 0.502594509 | None | None | N |
Y/P | 0.9439 | likely_pathogenic | 0.939 | pathogenic | 0.033 | Stabilizing | 0.976 | D | 0.68 | prob.neutral | None | None | None | None | N |
Y/Q | 0.7484 | likely_pathogenic | 0.7637 | pathogenic | 0.233 | Stabilizing | 0.976 | D | 0.671 | neutral | None | None | None | None | N |
Y/R | 0.6766 | likely_pathogenic | 0.6918 | pathogenic | 0.47 | Stabilizing | 0.929 | D | 0.667 | neutral | None | None | None | None | N |
Y/S | 0.352 | ambiguous | 0.3656 | ambiguous | -0.083 | Destabilizing | 0.908 | D | 0.643 | neutral | N | 0.50160857 | None | None | N |
Y/T | 0.6407 | likely_pathogenic | 0.6602 | pathogenic | -0.033 | Destabilizing | 0.929 | D | 0.647 | neutral | None | None | None | None | N |
Y/V | 0.4769 | ambiguous | 0.5172 | ambiguous | 0.033 | Stabilizing | 0.48 | N | 0.621 | neutral | None | None | None | None | N |
Y/W | 0.4017 | ambiguous | 0.4608 | ambiguous | -0.463 | Destabilizing | 0.98 | D | 0.637 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.