Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15596 | 47011;47012;47013 | chr2:178618764;178618763;178618762 | chr2:179483491;179483490;179483489 |
N2AB | 13955 | 42088;42089;42090 | chr2:178618764;178618763;178618762 | chr2:179483491;179483490;179483489 |
N2A | 13028 | 39307;39308;39309 | chr2:178618764;178618763;178618762 | chr2:179483491;179483490;179483489 |
N2B | 6531 | 19816;19817;19818 | chr2:178618764;178618763;178618762 | chr2:179483491;179483490;179483489 |
Novex-1 | 6656 | 20191;20192;20193 | chr2:178618764;178618763;178618762 | chr2:179483491;179483490;179483489 |
Novex-2 | 6723 | 20392;20393;20394 | chr2:178618764;178618763;178618762 | chr2:179483491;179483490;179483489 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1576521599 | None | 0.801 | N | 0.371 | 0.19 | 0.267755039894 | gnomAD-4.0.0 | 1.59587E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.78103E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1909 | likely_benign | 0.2793 | benign | -0.43 | Destabilizing | 0.688 | D | 0.382 | neutral | None | None | None | None | N |
K/C | 0.5865 | likely_pathogenic | 0.7539 | pathogenic | -0.302 | Destabilizing | 0.998 | D | 0.482 | neutral | None | None | None | None | N |
K/D | 0.4645 | ambiguous | 0.5801 | pathogenic | 0.052 | Stabilizing | 0.842 | D | 0.447 | neutral | None | None | None | None | N |
K/E | 0.1347 | likely_benign | 0.1877 | benign | 0.138 | Stabilizing | 0.454 | N | 0.335 | neutral | N | 0.507241194 | None | None | N |
K/F | 0.5525 | ambiguous | 0.7032 | pathogenic | -0.205 | Destabilizing | 0.949 | D | 0.489 | neutral | None | None | None | None | N |
K/G | 0.3531 | ambiguous | 0.4878 | ambiguous | -0.771 | Destabilizing | 0.915 | D | 0.457 | neutral | None | None | None | None | N |
K/H | 0.2772 | likely_benign | 0.3837 | ambiguous | -1.174 | Destabilizing | 0.974 | D | 0.433 | neutral | None | None | None | None | N |
K/I | 0.2183 | likely_benign | 0.2901 | benign | 0.434 | Stabilizing | 0.876 | D | 0.472 | neutral | N | 0.515132949 | None | None | N |
K/L | 0.2099 | likely_benign | 0.3121 | benign | 0.434 | Stabilizing | 0.016 | N | 0.229 | neutral | None | None | None | None | N |
K/M | 0.1761 | likely_benign | 0.2529 | benign | 0.316 | Stabilizing | 0.949 | D | 0.441 | neutral | None | None | None | None | N |
K/N | 0.3308 | likely_benign | 0.4306 | ambiguous | -0.163 | Destabilizing | 0.801 | D | 0.371 | neutral | N | 0.512818854 | None | None | N |
K/P | 0.2997 | likely_benign | 0.3976 | ambiguous | 0.177 | Stabilizing | 0.016 | N | 0.267 | neutral | None | None | None | None | N |
K/Q | 0.1187 | likely_benign | 0.1577 | benign | -0.244 | Destabilizing | 0.136 | N | 0.184 | neutral | N | 0.500593532 | None | None | N |
K/R | 0.0732 | likely_benign | 0.0892 | benign | -0.507 | Destabilizing | 0.012 | N | 0.198 | neutral | N | 0.471639029 | None | None | N |
K/S | 0.3018 | likely_benign | 0.412 | ambiguous | -0.776 | Destabilizing | 0.842 | D | 0.279 | neutral | None | None | None | None | N |
K/T | 0.1484 | likely_benign | 0.1997 | benign | -0.493 | Destabilizing | 0.891 | D | 0.397 | neutral | N | 0.510168819 | None | None | N |
K/V | 0.1897 | likely_benign | 0.263 | benign | 0.177 | Stabilizing | 0.728 | D | 0.461 | neutral | None | None | None | None | N |
K/W | 0.6223 | likely_pathogenic | 0.7825 | pathogenic | -0.109 | Destabilizing | 0.998 | D | 0.519 | neutral | None | None | None | None | N |
K/Y | 0.4688 | ambiguous | 0.6167 | pathogenic | 0.177 | Stabilizing | 0.991 | D | 0.487 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.