Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15607 | 47044;47045;47046 | chr2:178618731;178618730;178618729 | chr2:179483458;179483457;179483456 |
N2AB | 13966 | 42121;42122;42123 | chr2:178618731;178618730;178618729 | chr2:179483458;179483457;179483456 |
N2A | 13039 | 39340;39341;39342 | chr2:178618731;178618730;178618729 | chr2:179483458;179483457;179483456 |
N2B | 6542 | 19849;19850;19851 | chr2:178618731;178618730;178618729 | chr2:179483458;179483457;179483456 |
Novex-1 | 6667 | 20224;20225;20226 | chr2:178618731;178618730;178618729 | chr2:179483458;179483457;179483456 |
Novex-2 | 6734 | 20425;20426;20427 | chr2:178618731;178618730;178618729 | chr2:179483458;179483457;179483456 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.012 | N | 0.325 | 0.159 | 0.421799068777 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 1.01626E-03 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0543 | likely_benign | 0.0643 | benign | -0.699 | Destabilizing | None | N | 0.177 | neutral | N | 0.443383317 | None | None | N |
P/C | 0.2289 | likely_benign | 0.3487 | ambiguous | -0.704 | Destabilizing | 0.356 | N | 0.405 | neutral | None | None | None | None | N |
P/D | 0.1932 | likely_benign | 0.2996 | benign | -0.375 | Destabilizing | 0.072 | N | 0.344 | neutral | None | None | None | None | N |
P/E | 0.1245 | likely_benign | 0.1665 | benign | -0.437 | Destabilizing | 0.031 | N | 0.328 | neutral | None | None | None | None | N |
P/F | 0.1726 | likely_benign | 0.2719 | benign | -0.652 | Destabilizing | 0.214 | N | 0.447 | neutral | None | None | None | None | N |
P/G | 0.1392 | likely_benign | 0.2141 | benign | -0.895 | Destabilizing | 0.016 | N | 0.295 | neutral | None | None | None | None | N |
P/H | 0.0951 | likely_benign | 0.1179 | benign | -0.29 | Destabilizing | 0.56 | D | 0.397 | neutral | N | 0.488013969 | None | None | N |
P/I | 0.1049 | likely_benign | 0.1479 | benign | -0.306 | Destabilizing | 0.006 | N | 0.375 | neutral | None | None | None | None | N |
P/K | 0.0918 | likely_benign | 0.104 | benign | -0.624 | Destabilizing | 0.031 | N | 0.336 | neutral | None | None | None | None | N |
P/L | 0.0675 | likely_benign | 0.0802 | benign | -0.306 | Destabilizing | 0.012 | N | 0.325 | neutral | N | 0.467255555 | None | None | N |
P/M | 0.1268 | likely_benign | 0.1773 | benign | -0.455 | Destabilizing | 0.214 | N | 0.414 | neutral | None | None | None | None | N |
P/N | 0.1234 | likely_benign | 0.1901 | benign | -0.457 | Destabilizing | 0.072 | N | 0.401 | neutral | None | None | None | None | N |
P/Q | 0.0766 | likely_benign | 0.0884 | benign | -0.635 | Destabilizing | 0.136 | N | 0.399 | neutral | None | None | None | None | N |
P/R | 0.082 | likely_benign | 0.0892 | benign | -0.106 | Destabilizing | 0.055 | N | 0.431 | neutral | N | 0.486902662 | None | None | N |
P/S | 0.0732 | likely_benign | 0.098 | benign | -0.874 | Destabilizing | None | N | 0.162 | neutral | N | 0.402875514 | None | None | N |
P/T | 0.0612 | likely_benign | 0.0822 | benign | -0.827 | Destabilizing | None | N | 0.163 | neutral | N | 0.443844982 | None | None | N |
P/V | 0.0903 | likely_benign | 0.1152 | benign | -0.402 | Destabilizing | None | N | 0.221 | neutral | None | None | None | None | N |
P/W | 0.33 | likely_benign | 0.4564 | ambiguous | -0.763 | Destabilizing | 0.864 | D | 0.409 | neutral | None | None | None | None | N |
P/Y | 0.1785 | likely_benign | 0.2555 | benign | -0.469 | Destabilizing | 0.356 | N | 0.441 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.