Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15616 | 47071;47072;47073 | chr2:178618704;178618703;178618702 | chr2:179483431;179483430;179483429 |
N2AB | 13975 | 42148;42149;42150 | chr2:178618704;178618703;178618702 | chr2:179483431;179483430;179483429 |
N2A | 13048 | 39367;39368;39369 | chr2:178618704;178618703;178618702 | chr2:179483431;179483430;179483429 |
N2B | 6551 | 19876;19877;19878 | chr2:178618704;178618703;178618702 | chr2:179483431;179483430;179483429 |
Novex-1 | 6676 | 20251;20252;20253 | chr2:178618704;178618703;178618702 | chr2:179483431;179483430;179483429 |
Novex-2 | 6743 | 20452;20453;20454 | chr2:178618704;178618703;178618702 | chr2:179483431;179483430;179483429 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs794727331 | None | 0.835 | N | 0.331 | 0.21 | 0.3691244813 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs794727331 | None | 0.835 | N | 0.331 | 0.21 | 0.3691244813 | gnomAD-4.0.0 | 1.11655E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.52678E-05 | 0 | 0 |
T/M | rs368057764 | 0.058 | 1.0 | N | 0.545 | 0.446 | 0.576013683475 | gnomAD-2.1.1 | 2.15173E-04 | None | None | None | None | N | None | 4.14E-05 | 2.84E-05 | None | 0 | 1.45349E-03 | None | 7.84929E-04 | None | 4.01E-05 | 3.14E-05 | 1.41243E-04 |
T/M | rs368057764 | 0.058 | 1.0 | N | 0.545 | 0.446 | 0.576013683475 | gnomAD-3.1.2 | 1.11969E-04 | None | None | None | None | N | None | 0 | 6.57E-05 | 0 | 0 | 1.16731E-03 | None | 0 | 0 | 2.95E-05 | 1.65632E-03 | 0 |
T/M | rs368057764 | 0.058 | 1.0 | N | 0.545 | 0.446 | 0.576013683475 | 1000 genomes | 5.99042E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 2E-03 | None |
T/M | rs368057764 | 0.058 | 1.0 | N | 0.545 | 0.446 | 0.576013683475 | gnomAD-4.0.0 | 9.67704E-05 | None | None | None | None | N | None | 1.33551E-05 | 3.34314E-05 | None | 0 | 6.04622E-04 | None | 4.69381E-05 | 0 | 3.13851E-05 | 7.25147E-04 | 3.20626E-04 |
T/R | rs368057764 | None | 0.998 | N | 0.54 | 0.482 | 0.559961094632 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/R | rs368057764 | None | 0.998 | N | 0.54 | 0.482 | 0.559961094632 | gnomAD-4.0.0 | 6.5864E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47327E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0819 | likely_benign | 0.1085 | benign | -0.691 | Destabilizing | 0.835 | D | 0.331 | neutral | N | 0.511265133 | None | None | N |
T/C | 0.4262 | ambiguous | 0.5581 | ambiguous | -0.398 | Destabilizing | 1.0 | D | 0.555 | neutral | None | None | None | None | N |
T/D | 0.2347 | likely_benign | 0.3084 | benign | -0.207 | Destabilizing | 0.97 | D | 0.448 | neutral | None | None | None | None | N |
T/E | 0.2348 | likely_benign | 0.336 | benign | -0.236 | Destabilizing | 0.97 | D | 0.463 | neutral | None | None | None | None | N |
T/F | 0.2407 | likely_benign | 0.355 | ambiguous | -0.889 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/G | 0.1648 | likely_benign | 0.2092 | benign | -0.913 | Destabilizing | 0.97 | D | 0.495 | neutral | None | None | None | None | N |
T/H | 0.2454 | likely_benign | 0.3187 | benign | -1.203 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
T/I | 0.2059 | likely_benign | 0.3291 | benign | -0.202 | Destabilizing | 0.996 | D | 0.509 | neutral | None | None | None | None | N |
T/K | 0.1729 | likely_benign | 0.2181 | benign | -0.694 | Destabilizing | 0.984 | D | 0.449 | neutral | N | 0.504306026 | None | None | N |
T/L | 0.1208 | likely_benign | 0.1671 | benign | -0.202 | Destabilizing | 0.985 | D | 0.426 | neutral | None | None | None | None | N |
T/M | 0.1076 | likely_benign | 0.1506 | benign | 0.129 | Stabilizing | 1.0 | D | 0.545 | neutral | N | 0.516275123 | None | None | N |
T/N | 0.1047 | likely_benign | 0.1202 | benign | -0.57 | Destabilizing | 0.97 | D | 0.414 | neutral | None | None | None | None | N |
T/P | 0.2662 | likely_benign | 0.347 | ambiguous | -0.333 | Destabilizing | 0.994 | D | 0.511 | neutral | N | 0.515493618 | None | None | N |
T/Q | 0.2057 | likely_benign | 0.2702 | benign | -0.783 | Destabilizing | 0.996 | D | 0.542 | neutral | None | None | None | None | N |
T/R | 0.1677 | likely_benign | 0.2123 | benign | -0.39 | Destabilizing | 0.998 | D | 0.54 | neutral | N | 0.511265133 | None | None | N |
T/S | 0.082 | likely_benign | 0.0963 | benign | -0.818 | Destabilizing | 0.287 | N | 0.147 | neutral | N | 0.49705073 | None | None | N |
T/V | 0.1476 | likely_benign | 0.2264 | benign | -0.333 | Destabilizing | 0.985 | D | 0.387 | neutral | None | None | None | None | N |
T/W | 0.5973 | likely_pathogenic | 0.7008 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/Y | 0.3174 | likely_benign | 0.3988 | ambiguous | -0.6 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.