Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15618 | 47077;47078;47079 | chr2:178618698;178618697;178618696 | chr2:179483425;179483424;179483423 |
N2AB | 13977 | 42154;42155;42156 | chr2:178618698;178618697;178618696 | chr2:179483425;179483424;179483423 |
N2A | 13050 | 39373;39374;39375 | chr2:178618698;178618697;178618696 | chr2:179483425;179483424;179483423 |
N2B | 6553 | 19882;19883;19884 | chr2:178618698;178618697;178618696 | chr2:179483425;179483424;179483423 |
Novex-1 | 6678 | 20257;20258;20259 | chr2:178618698;178618697;178618696 | chr2:179483425;179483424;179483423 |
Novex-2 | 6745 | 20458;20459;20460 | chr2:178618698;178618697;178618696 | chr2:179483425;179483424;179483423 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.324 | N | 0.422 | 0.242 | 0.326881540566 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1322 | likely_benign | 0.1598 | benign | -0.764 | Destabilizing | 0.324 | N | 0.416 | neutral | N | 0.493701351 | None | None | N |
E/C | 0.7089 | likely_pathogenic | 0.7875 | pathogenic | -0.347 | Destabilizing | 0.981 | D | 0.497 | neutral | None | None | None | None | N |
E/D | 0.0805 | likely_benign | 0.0999 | benign | -0.609 | Destabilizing | None | N | 0.13 | neutral | N | 0.396135264 | None | None | N |
E/F | 0.5518 | ambiguous | 0.6305 | pathogenic | -0.448 | Destabilizing | 0.932 | D | 0.457 | neutral | None | None | None | None | N |
E/G | 0.104 | likely_benign | 0.1202 | benign | -1.023 | Destabilizing | 0.193 | N | 0.438 | neutral | N | 0.453366357 | None | None | N |
E/H | 0.3419 | ambiguous | 0.3959 | ambiguous | -0.381 | Destabilizing | 0.818 | D | 0.391 | neutral | None | None | None | None | N |
E/I | 0.2985 | likely_benign | 0.3777 | ambiguous | -0.09 | Destabilizing | 0.818 | D | 0.455 | neutral | None | None | None | None | N |
E/K | 0.139 | likely_benign | 0.1693 | benign | -0.267 | Destabilizing | 0.324 | N | 0.422 | neutral | N | 0.491130694 | None | None | N |
E/L | 0.2928 | likely_benign | 0.3691 | ambiguous | -0.09 | Destabilizing | 0.818 | D | 0.431 | neutral | None | None | None | None | N |
E/M | 0.374 | ambiguous | 0.4565 | ambiguous | 0.14 | Stabilizing | 0.981 | D | 0.449 | neutral | None | None | None | None | N |
E/N | 0.1293 | likely_benign | 0.1489 | benign | -0.589 | Destabilizing | 0.002 | N | 0.217 | neutral | None | None | None | None | N |
E/P | 0.6268 | likely_pathogenic | 0.721 | pathogenic | -0.295 | Destabilizing | 0.818 | D | 0.423 | neutral | None | None | None | None | N |
E/Q | 0.1274 | likely_benign | 0.1436 | benign | -0.531 | Destabilizing | 0.324 | N | 0.395 | neutral | N | 0.493701351 | None | None | N |
E/R | 0.2347 | likely_benign | 0.2747 | benign | 0.059 | Stabilizing | 0.69 | D | 0.382 | neutral | None | None | None | None | N |
E/S | 0.1231 | likely_benign | 0.1435 | benign | -0.817 | Destabilizing | 0.241 | N | 0.397 | neutral | None | None | None | None | N |
E/T | 0.1437 | likely_benign | 0.1661 | benign | -0.614 | Destabilizing | 0.388 | N | 0.422 | neutral | None | None | None | None | N |
E/V | 0.204 | likely_benign | 0.2616 | benign | -0.295 | Destabilizing | 0.773 | D | 0.432 | neutral | N | 0.494158355 | None | None | N |
E/W | 0.776 | likely_pathogenic | 0.8503 | pathogenic | -0.22 | Destabilizing | 0.981 | D | 0.581 | neutral | None | None | None | None | N |
E/Y | 0.4283 | ambiguous | 0.4892 | ambiguous | -0.214 | Destabilizing | 0.932 | D | 0.45 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.