Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15622 | 47089;47090;47091 | chr2:178618686;178618685;178618684 | chr2:179483413;179483412;179483411 |
N2AB | 13981 | 42166;42167;42168 | chr2:178618686;178618685;178618684 | chr2:179483413;179483412;179483411 |
N2A | 13054 | 39385;39386;39387 | chr2:178618686;178618685;178618684 | chr2:179483413;179483412;179483411 |
N2B | 6557 | 19894;19895;19896 | chr2:178618686;178618685;178618684 | chr2:179483413;179483412;179483411 |
Novex-1 | 6682 | 20269;20270;20271 | chr2:178618686;178618685;178618684 | chr2:179483413;179483412;179483411 |
Novex-2 | 6749 | 20470;20471;20472 | chr2:178618686;178618685;178618684 | chr2:179483413;179483412;179483411 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs758851565 | -0.227 | 0.91 | N | 0.695 | 0.254 | 0.296329037015 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
F/L | rs758851565 | -0.227 | 0.91 | N | 0.695 | 0.254 | 0.296329037015 | gnomAD-4.0.0 | 1.59483E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78489E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9158 | likely_pathogenic | 0.9158 | pathogenic | -1.793 | Destabilizing | 0.985 | D | 0.772 | deleterious | None | None | None | None | N |
F/C | 0.4879 | ambiguous | 0.5335 | ambiguous | -1.21 | Destabilizing | 1.0 | D | 0.812 | deleterious | N | 0.449679269 | None | None | N |
F/D | 0.9949 | likely_pathogenic | 0.994 | pathogenic | -2.718 | Highly Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
F/E | 0.9891 | likely_pathogenic | 0.9865 | pathogenic | -2.469 | Highly Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
F/G | 0.9684 | likely_pathogenic | 0.9686 | pathogenic | -2.265 | Highly Destabilizing | 0.999 | D | 0.832 | deleterious | None | None | None | None | N |
F/H | 0.8457 | likely_pathogenic | 0.847 | pathogenic | -1.473 | Destabilizing | 0.991 | D | 0.747 | deleterious | None | None | None | None | N |
F/I | 0.4629 | ambiguous | 0.5127 | ambiguous | -0.264 | Destabilizing | 0.98 | D | 0.706 | prob.neutral | N | 0.445502572 | None | None | N |
F/K | 0.9767 | likely_pathogenic | 0.974 | pathogenic | -1.576 | Destabilizing | 0.996 | D | 0.858 | deleterious | None | None | None | None | N |
F/L | 0.8367 | likely_pathogenic | 0.8612 | pathogenic | -0.264 | Destabilizing | 0.91 | D | 0.695 | prob.neutral | N | 0.375286567 | None | None | N |
F/M | 0.7026 | likely_pathogenic | 0.7257 | pathogenic | -0.243 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
F/N | 0.974 | likely_pathogenic | 0.9669 | pathogenic | -2.261 | Highly Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
F/P | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -0.785 | Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
F/Q | 0.9599 | likely_pathogenic | 0.9553 | pathogenic | -1.993 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
F/R | 0.9433 | likely_pathogenic | 0.9388 | pathogenic | -1.635 | Destabilizing | 0.996 | D | 0.864 | deleterious | None | None | None | None | N |
F/S | 0.932 | likely_pathogenic | 0.9353 | pathogenic | -2.737 | Highly Destabilizing | 0.994 | D | 0.818 | deleterious | N | 0.45037515 | None | None | N |
F/T | 0.9516 | likely_pathogenic | 0.9526 | pathogenic | -2.353 | Highly Destabilizing | 0.996 | D | 0.814 | deleterious | None | None | None | None | N |
F/V | 0.4744 | ambiguous | 0.5177 | ambiguous | -0.785 | Destabilizing | 0.961 | D | 0.729 | prob.delet. | N | 0.444311126 | None | None | N |
F/W | 0.6179 | likely_pathogenic | 0.6494 | pathogenic | 0.153 | Stabilizing | 0.996 | D | 0.705 | prob.neutral | None | None | None | None | N |
F/Y | 0.1873 | likely_benign | 0.1955 | benign | -0.143 | Destabilizing | 0.122 | N | 0.233 | neutral | N | 0.448991685 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.