Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15626 | 47101;47102;47103 | chr2:178618674;178618673;178618672 | chr2:179483401;179483400;179483399 |
N2AB | 13985 | 42178;42179;42180 | chr2:178618674;178618673;178618672 | chr2:179483401;179483400;179483399 |
N2A | 13058 | 39397;39398;39399 | chr2:178618674;178618673;178618672 | chr2:179483401;179483400;179483399 |
N2B | 6561 | 19906;19907;19908 | chr2:178618674;178618673;178618672 | chr2:179483401;179483400;179483399 |
Novex-1 | 6686 | 20281;20282;20283 | chr2:178618674;178618673;178618672 | chr2:179483401;179483400;179483399 |
Novex-2 | 6753 | 20482;20483;20484 | chr2:178618674;178618673;178618672 | chr2:179483401;179483400;179483399 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs753479822 | -0.283 | 0.22 | N | 0.493 | 0.088 | 0.239305524855 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs753479822 | -0.283 | 0.22 | N | 0.493 | 0.088 | 0.239305524855 | gnomAD-4.0.0 | 1.59455E-06 | None | None | None | None | N | None | 0 | 2.292E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1431 | likely_benign | 0.1905 | benign | -0.633 | Destabilizing | 0.124 | N | 0.455 | neutral | N | 0.451787431 | None | None | N |
E/C | 0.7592 | likely_pathogenic | 0.8551 | pathogenic | -0.29 | Destabilizing | 0.968 | D | 0.651 | neutral | None | None | None | None | N |
E/D | 0.0895 | likely_benign | 0.117 | benign | -0.494 | Destabilizing | None | N | 0.2 | neutral | N | 0.443306031 | None | None | N |
E/F | 0.6763 | likely_pathogenic | 0.7766 | pathogenic | -0.359 | Destabilizing | 0.89 | D | 0.569 | neutral | None | None | None | None | N |
E/G | 0.1709 | likely_benign | 0.2288 | benign | -0.875 | Destabilizing | 0.22 | N | 0.493 | neutral | N | 0.447663064 | None | None | N |
E/H | 0.364 | ambiguous | 0.4936 | ambiguous | -0.259 | Destabilizing | 0.726 | D | 0.393 | neutral | None | None | None | None | N |
E/I | 0.3917 | ambiguous | 0.5311 | ambiguous | -0.009 | Destabilizing | 0.726 | D | 0.565 | neutral | None | None | None | None | N |
E/K | 0.1768 | likely_benign | 0.242 | benign | -0.092 | Destabilizing | 0.001 | N | 0.25 | neutral | N | 0.445950836 | None | None | N |
E/L | 0.3788 | ambiguous | 0.5408 | ambiguous | -0.009 | Destabilizing | 0.567 | D | 0.512 | neutral | None | None | None | None | N |
E/M | 0.4446 | ambiguous | 0.5959 | pathogenic | 0.147 | Stabilizing | 0.968 | D | 0.537 | neutral | None | None | None | None | N |
E/N | 0.1798 | likely_benign | 0.2363 | benign | -0.427 | Destabilizing | 0.272 | N | 0.453 | neutral | None | None | None | None | N |
E/P | 0.6763 | likely_pathogenic | 0.7902 | pathogenic | -0.197 | Destabilizing | 0.726 | D | 0.444 | neutral | None | None | None | None | N |
E/Q | 0.1486 | likely_benign | 0.1867 | benign | -0.367 | Destabilizing | 0.124 | N | 0.472 | neutral | N | 0.451179941 | None | None | N |
E/R | 0.2815 | likely_benign | 0.3583 | ambiguous | 0.189 | Stabilizing | 0.157 | N | 0.439 | neutral | None | None | None | None | N |
E/S | 0.1664 | likely_benign | 0.224 | benign | -0.633 | Destabilizing | 0.157 | N | 0.435 | neutral | None | None | None | None | N |
E/T | 0.1839 | likely_benign | 0.2621 | benign | -0.439 | Destabilizing | 0.272 | N | 0.479 | neutral | None | None | None | None | N |
E/V | 0.2285 | likely_benign | 0.3152 | benign | -0.197 | Destabilizing | 0.497 | N | 0.483 | neutral | N | 0.454893113 | None | None | N |
E/W | 0.8355 | likely_pathogenic | 0.9069 | pathogenic | -0.154 | Destabilizing | 0.968 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/Y | 0.5186 | ambiguous | 0.6419 | pathogenic | -0.125 | Destabilizing | 0.726 | D | 0.533 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.