Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15628 | 47107;47108;47109 | chr2:178618668;178618667;178618666 | chr2:179483395;179483394;179483393 |
N2AB | 13987 | 42184;42185;42186 | chr2:178618668;178618667;178618666 | chr2:179483395;179483394;179483393 |
N2A | 13060 | 39403;39404;39405 | chr2:178618668;178618667;178618666 | chr2:179483395;179483394;179483393 |
N2B | 6563 | 19912;19913;19914 | chr2:178618668;178618667;178618666 | chr2:179483395;179483394;179483393 |
Novex-1 | 6688 | 20287;20288;20289 | chr2:178618668;178618667;178618666 | chr2:179483395;179483394;179483393 |
Novex-2 | 6755 | 20488;20489;20490 | chr2:178618668;178618667;178618666 | chr2:179483395;179483394;179483393 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs2057772159 | None | 0.193 | N | 0.421 | 0.115 | 0.277317399466 | gnomAD-4.0.0 | 2.05437E-06 | None | None | None | None | I | None | 2.99634E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99999E-07 | 0 | 1.65893E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2128 | likely_benign | 0.3074 | benign | 0.016 | Stabilizing | 0.241 | N | 0.445 | neutral | None | None | None | None | I |
K/C | 0.4976 | ambiguous | 0.6539 | pathogenic | -0.245 | Destabilizing | 0.981 | D | 0.49 | neutral | None | None | None | None | I |
K/D | 0.3539 | ambiguous | 0.4843 | ambiguous | 0.141 | Stabilizing | 0.388 | N | 0.419 | neutral | None | None | None | None | I |
K/E | 0.1038 | likely_benign | 0.1503 | benign | 0.173 | Stabilizing | 0.193 | N | 0.453 | neutral | N | 0.506222558 | None | None | I |
K/F | 0.6415 | likely_pathogenic | 0.735 | pathogenic | -0.067 | Destabilizing | 0.69 | D | 0.458 | neutral | None | None | None | None | I |
K/G | 0.2005 | likely_benign | 0.31 | benign | -0.221 | Destabilizing | 0.388 | N | 0.419 | neutral | None | None | None | None | I |
K/H | 0.2425 | likely_benign | 0.3086 | benign | -0.463 | Destabilizing | 0.005 | N | 0.441 | neutral | None | None | None | None | I |
K/I | 0.3149 | likely_benign | 0.3832 | ambiguous | 0.573 | Stabilizing | 0.527 | D | 0.439 | neutral | None | None | None | None | I |
K/L | 0.2713 | likely_benign | 0.3673 | ambiguous | 0.573 | Stabilizing | 0.002 | N | 0.305 | neutral | None | None | None | None | I |
K/M | 0.1982 | likely_benign | 0.2614 | benign | 0.252 | Stabilizing | 0.627 | D | 0.433 | neutral | N | 0.515493618 | None | None | I |
K/N | 0.2306 | likely_benign | 0.3178 | benign | 0.131 | Stabilizing | 0.324 | N | 0.423 | neutral | N | 0.511265133 | None | None | I |
K/P | 0.7696 | likely_pathogenic | 0.8621 | pathogenic | 0.417 | Stabilizing | 0.818 | D | 0.428 | neutral | None | None | None | None | I |
K/Q | 0.0886 | likely_benign | 0.1099 | benign | 0.014 | Stabilizing | 0.001 | N | 0.232 | neutral | N | 0.509608057 | None | None | I |
K/R | 0.0786 | likely_benign | 0.0874 | benign | -0.101 | Destabilizing | 0.193 | N | 0.421 | neutral | N | 0.512649251 | None | None | I |
K/S | 0.2047 | likely_benign | 0.2974 | benign | -0.371 | Destabilizing | 0.241 | N | 0.401 | neutral | None | None | None | None | I |
K/T | 0.1077 | likely_benign | 0.1454 | benign | -0.176 | Destabilizing | 0.324 | N | 0.415 | neutral | N | 0.510637139 | None | None | I |
K/V | 0.2253 | likely_benign | 0.2953 | benign | 0.417 | Stabilizing | 0.241 | N | 0.421 | neutral | None | None | None | None | I |
K/W | 0.679 | likely_pathogenic | 0.7809 | pathogenic | -0.082 | Destabilizing | 0.981 | D | 0.585 | neutral | None | None | None | None | I |
K/Y | 0.552 | ambiguous | 0.6584 | pathogenic | 0.264 | Stabilizing | 0.69 | D | 0.453 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.