Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1563 | 4912;4913;4914 | chr2:178777276;178777275;178777274 | chr2:179642003;179642002;179642001 |
N2AB | 1563 | 4912;4913;4914 | chr2:178777276;178777275;178777274 | chr2:179642003;179642002;179642001 |
N2A | 1563 | 4912;4913;4914 | chr2:178777276;178777275;178777274 | chr2:179642003;179642002;179642001 |
N2B | 1517 | 4774;4775;4776 | chr2:178777276;178777275;178777274 | chr2:179642003;179642002;179642001 |
Novex-1 | 1517 | 4774;4775;4776 | chr2:178777276;178777275;178777274 | chr2:179642003;179642002;179642001 |
Novex-2 | 1517 | 4774;4775;4776 | chr2:178777276;178777275;178777274 | chr2:179642003;179642002;179642001 |
Novex-3 | 1563 | 4912;4913;4914 | chr2:178777276;178777275;178777274 | chr2:179642003;179642002;179642001 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.638 | N | 0.637 | 0.164 | 0.337621943819 | gnomAD-4.0.0 | 1.59083E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77562E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4403 | ambiguous | 0.4316 | ambiguous | 0.072 | Stabilizing | 0.399 | N | 0.567 | neutral | None | None | None | None | N |
K/C | 0.7067 | likely_pathogenic | 0.6633 | pathogenic | -0.283 | Destabilizing | 0.982 | D | 0.647 | neutral | None | None | None | None | N |
K/D | 0.7376 | likely_pathogenic | 0.7341 | pathogenic | -0.223 | Destabilizing | 0.7 | D | 0.638 | neutral | None | None | None | None | N |
K/E | 0.2524 | likely_benign | 0.261 | benign | -0.224 | Destabilizing | 0.201 | N | 0.548 | neutral | N | 0.507987155 | None | None | N |
K/F | 0.8493 | likely_pathogenic | 0.8336 | pathogenic | -0.193 | Destabilizing | 0.947 | D | 0.614 | neutral | None | None | None | None | N |
K/G | 0.4477 | ambiguous | 0.4418 | ambiguous | -0.088 | Destabilizing | 0.7 | D | 0.489 | neutral | None | None | None | None | N |
K/H | 0.3229 | likely_benign | 0.3032 | benign | -0.229 | Destabilizing | 0.947 | D | 0.633 | neutral | None | None | None | None | N |
K/I | 0.5102 | ambiguous | 0.503 | ambiguous | 0.414 | Stabilizing | 0.781 | D | 0.635 | neutral | D | 0.590121061 | None | None | N |
K/L | 0.4504 | ambiguous | 0.4392 | ambiguous | 0.414 | Stabilizing | 0.7 | D | 0.489 | neutral | None | None | None | None | N |
K/M | 0.3657 | ambiguous | 0.3591 | ambiguous | 0.011 | Stabilizing | 0.982 | D | 0.629 | neutral | None | None | None | None | N |
K/N | 0.5387 | ambiguous | 0.5208 | ambiguous | 0.16 | Stabilizing | 0.638 | D | 0.637 | neutral | N | 0.515408872 | None | None | N |
K/P | 0.7586 | likely_pathogenic | 0.7558 | pathogenic | 0.325 | Stabilizing | 0.826 | D | 0.647 | neutral | None | None | None | None | N |
K/Q | 0.128 | likely_benign | 0.1264 | benign | 0.018 | Stabilizing | 0.638 | D | 0.639 | neutral | N | 0.469568649 | None | None | N |
K/R | 0.0693 | likely_benign | 0.069 | benign | -0.02 | Destabilizing | 0.002 | N | 0.219 | neutral | N | 0.468380363 | None | None | N |
K/S | 0.496 | ambiguous | 0.4836 | ambiguous | -0.204 | Destabilizing | 0.399 | N | 0.601 | neutral | None | None | None | None | N |
K/T | 0.2681 | likely_benign | 0.265 | benign | -0.079 | Destabilizing | 0.638 | D | 0.597 | neutral | N | 0.49482485 | None | None | N |
K/V | 0.4493 | ambiguous | 0.449 | ambiguous | 0.325 | Stabilizing | 0.7 | D | 0.573 | neutral | None | None | None | None | N |
K/W | 0.7224 | likely_pathogenic | 0.6966 | pathogenic | -0.288 | Destabilizing | 0.982 | D | 0.663 | neutral | None | None | None | None | N |
K/Y | 0.7264 | likely_pathogenic | 0.7033 | pathogenic | 0.065 | Stabilizing | 0.826 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.