Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15630 | 47113;47114;47115 | chr2:178618662;178618661;178618660 | chr2:179483389;179483388;179483387 |
N2AB | 13989 | 42190;42191;42192 | chr2:178618662;178618661;178618660 | chr2:179483389;179483388;179483387 |
N2A | 13062 | 39409;39410;39411 | chr2:178618662;178618661;178618660 | chr2:179483389;179483388;179483387 |
N2B | 6565 | 19918;19919;19920 | chr2:178618662;178618661;178618660 | chr2:179483389;179483388;179483387 |
Novex-1 | 6690 | 20293;20294;20295 | chr2:178618662;178618661;178618660 | chr2:179483389;179483388;179483387 |
Novex-2 | 6757 | 20494;20495;20496 | chr2:178618662;178618661;178618660 | chr2:179483389;179483388;179483387 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.029 | N | 0.427 | 0.077 | 0.256283259241 | gnomAD-4.0.0 | 1.59439E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86356E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.061 | likely_benign | 0.0767 | benign | -0.176 | Destabilizing | None | N | 0.139 | neutral | N | 0.36261067 | None | None | I |
G/C | 0.135 | likely_benign | 0.2023 | benign | -0.849 | Destabilizing | 0.676 | D | 0.397 | neutral | None | None | None | None | I |
G/D | 0.0724 | likely_benign | 0.0956 | benign | -0.506 | Destabilizing | None | N | 0.171 | neutral | None | None | None | None | I |
G/E | 0.0691 | likely_benign | 0.0958 | benign | -0.657 | Destabilizing | None | N | 0.157 | neutral | N | 0.392827241 | None | None | I |
G/F | 0.2984 | likely_benign | 0.4397 | ambiguous | -0.88 | Destabilizing | 0.356 | N | 0.439 | neutral | None | None | None | None | I |
G/H | 0.1809 | likely_benign | 0.2651 | benign | -0.355 | Destabilizing | 0.356 | N | 0.397 | neutral | None | None | None | None | I |
G/I | 0.1142 | likely_benign | 0.1562 | benign | -0.326 | Destabilizing | 0.214 | N | 0.465 | neutral | None | None | None | None | I |
G/K | 0.1651 | likely_benign | 0.2428 | benign | -0.759 | Destabilizing | None | N | 0.223 | neutral | None | None | None | None | I |
G/L | 0.1619 | likely_benign | 0.2562 | benign | -0.326 | Destabilizing | 0.038 | N | 0.448 | neutral | None | None | None | None | I |
G/M | 0.1791 | likely_benign | 0.2708 | benign | -0.518 | Destabilizing | 0.628 | D | 0.402 | neutral | None | None | None | None | I |
G/N | 0.0959 | likely_benign | 0.1263 | benign | -0.409 | Destabilizing | 0.038 | N | 0.285 | neutral | None | None | None | None | I |
G/P | 0.3509 | ambiguous | 0.524 | ambiguous | -0.245 | Destabilizing | 0.136 | N | 0.45 | neutral | None | None | None | None | I |
G/Q | 0.1277 | likely_benign | 0.184 | benign | -0.656 | Destabilizing | 0.038 | N | 0.456 | neutral | None | None | None | None | I |
G/R | 0.1573 | likely_benign | 0.2261 | benign | -0.34 | Destabilizing | 0.029 | N | 0.427 | neutral | N | 0.415320593 | None | None | I |
G/S | 0.0641 | likely_benign | 0.0738 | benign | -0.556 | Destabilizing | None | N | 0.081 | neutral | None | None | None | None | I |
G/T | 0.0623 | likely_benign | 0.0781 | benign | -0.634 | Destabilizing | 0.016 | N | 0.377 | neutral | None | None | None | None | I |
G/V | 0.0873 | likely_benign | 0.1153 | benign | -0.245 | Destabilizing | 0.029 | N | 0.453 | neutral | N | 0.417163264 | None | None | I |
G/W | 0.2307 | likely_benign | 0.3141 | benign | -1.047 | Destabilizing | 0.864 | D | 0.405 | neutral | None | None | None | None | I |
G/Y | 0.218 | likely_benign | 0.3178 | benign | -0.698 | Destabilizing | 0.356 | N | 0.438 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.