Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15637 | 47134;47135;47136 | chr2:178618641;178618640;178618639 | chr2:179483368;179483367;179483366 |
N2AB | 13996 | 42211;42212;42213 | chr2:178618641;178618640;178618639 | chr2:179483368;179483367;179483366 |
N2A | 13069 | 39430;39431;39432 | chr2:178618641;178618640;178618639 | chr2:179483368;179483367;179483366 |
N2B | 6572 | 19939;19940;19941 | chr2:178618641;178618640;178618639 | chr2:179483368;179483367;179483366 |
Novex-1 | 6697 | 20314;20315;20316 | chr2:178618641;178618640;178618639 | chr2:179483368;179483367;179483366 |
Novex-2 | 6764 | 20515;20516;20517 | chr2:178618641;178618640;178618639 | chr2:179483368;179483367;179483366 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs1029825916 | None | 0.025 | N | 0.408 | 0.063 | 0.158396225186 | gnomAD-4.0.0 | 2.73894E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79993E-06 | 0 | 3.31774E-05 |
I/T | None | None | 0.124 | N | 0.715 | 0.255 | 0.515659482774 | gnomAD-4.0.0 | 1.59407E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86325E-06 | 0 | 0 |
I/V | None | None | None | N | 0.329 | 0.053 | 0.107399877778 | gnomAD-4.0.0 | 1.36947E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79993E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5985 | likely_pathogenic | 0.7115 | pathogenic | -2.652 | Highly Destabilizing | 0.072 | N | 0.721 | prob.delet. | None | None | None | None | N |
I/C | 0.8536 | likely_pathogenic | 0.8908 | pathogenic | -1.575 | Destabilizing | 0.909 | D | 0.781 | deleterious | None | None | None | None | N |
I/D | 0.9951 | likely_pathogenic | 0.9966 | pathogenic | -3.391 | Highly Destabilizing | 0.726 | D | 0.841 | deleterious | None | None | None | None | N |
I/E | 0.9854 | likely_pathogenic | 0.9886 | pathogenic | -3.089 | Highly Destabilizing | 0.726 | D | 0.822 | deleterious | None | None | None | None | N |
I/F | 0.4055 | ambiguous | 0.4672 | ambiguous | -1.667 | Destabilizing | 0.497 | N | 0.687 | prob.neutral | N | 0.453420042 | None | None | N |
I/G | 0.9271 | likely_pathogenic | 0.9562 | pathogenic | -3.217 | Highly Destabilizing | 0.726 | D | 0.815 | deleterious | None | None | None | None | N |
I/H | 0.9829 | likely_pathogenic | 0.9869 | pathogenic | -2.907 | Highly Destabilizing | 0.968 | D | 0.855 | deleterious | None | None | None | None | N |
I/K | 0.9779 | likely_pathogenic | 0.9795 | pathogenic | -2.04 | Highly Destabilizing | 0.726 | D | 0.826 | deleterious | None | None | None | None | N |
I/L | 0.1817 | likely_benign | 0.2055 | benign | -0.95 | Destabilizing | 0.025 | N | 0.408 | neutral | N | 0.435294528 | None | None | N |
I/M | 0.1819 | likely_benign | 0.2069 | benign | -0.917 | Destabilizing | 0.497 | N | 0.668 | neutral | N | 0.455541523 | None | None | N |
I/N | 0.9483 | likely_pathogenic | 0.9558 | pathogenic | -2.697 | Highly Destabilizing | 0.859 | D | 0.847 | deleterious | N | 0.457109294 | None | None | N |
I/P | 0.9824 | likely_pathogenic | 0.9872 | pathogenic | -1.509 | Destabilizing | 0.89 | D | 0.846 | deleterious | None | None | None | None | N |
I/Q | 0.9722 | likely_pathogenic | 0.9773 | pathogenic | -2.396 | Highly Destabilizing | 0.89 | D | 0.845 | deleterious | None | None | None | None | N |
I/R | 0.9589 | likely_pathogenic | 0.9648 | pathogenic | -2.035 | Highly Destabilizing | 0.726 | D | 0.846 | deleterious | None | None | None | None | N |
I/S | 0.8891 | likely_pathogenic | 0.9192 | pathogenic | -3.205 | Highly Destabilizing | 0.497 | N | 0.795 | deleterious | N | 0.456486004 | None | None | N |
I/T | 0.6254 | likely_pathogenic | 0.7211 | pathogenic | -2.755 | Highly Destabilizing | 0.124 | N | 0.715 | prob.delet. | N | 0.455541523 | None | None | N |
I/V | 0.0656 | likely_benign | 0.0792 | benign | -1.509 | Destabilizing | None | N | 0.329 | neutral | N | 0.394513697 | None | None | N |
I/W | 0.975 | likely_pathogenic | 0.981 | pathogenic | -2.11 | Highly Destabilizing | 0.968 | D | 0.841 | deleterious | None | None | None | None | N |
I/Y | 0.9136 | likely_pathogenic | 0.9261 | pathogenic | -1.851 | Destabilizing | 0.726 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.