Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15639 | 47140;47141;47142 | chr2:178618635;178618634;178618633 | chr2:179483362;179483361;179483360 |
N2AB | 13998 | 42217;42218;42219 | chr2:178618635;178618634;178618633 | chr2:179483362;179483361;179483360 |
N2A | 13071 | 39436;39437;39438 | chr2:178618635;178618634;178618633 | chr2:179483362;179483361;179483360 |
N2B | 6574 | 19945;19946;19947 | chr2:178618635;178618634;178618633 | chr2:179483362;179483361;179483360 |
Novex-1 | 6699 | 20320;20321;20322 | chr2:178618635;178618634;178618633 | chr2:179483362;179483361;179483360 |
Novex-2 | 6766 | 20521;20522;20523 | chr2:178618635;178618634;178618633 | chr2:179483362;179483361;179483360 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1226774486 | None | 0.994 | N | 0.759 | 0.356 | 0.654265926928 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/F | rs1226774486 | None | 0.994 | N | 0.759 | 0.356 | 0.654265926928 | gnomAD-4.0.0 | 3.85041E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19193E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7993 | likely_pathogenic | 0.8233 | pathogenic | -3.017 | Highly Destabilizing | 0.97 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/C | 0.7759 | likely_pathogenic | 0.8043 | pathogenic | -2.306 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -3.629 | Highly Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | N |
L/E | 0.9917 | likely_pathogenic | 0.9908 | pathogenic | -3.402 | Highly Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
L/F | 0.3862 | ambiguous | 0.4619 | ambiguous | -1.735 | Destabilizing | 0.994 | D | 0.759 | deleterious | N | 0.507032058 | None | None | N |
L/G | 0.966 | likely_pathogenic | 0.9692 | pathogenic | -3.544 | Highly Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
L/H | 0.9727 | likely_pathogenic | 0.974 | pathogenic | -2.903 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | N | 0.508103218 | None | None | N |
L/I | 0.1148 | likely_benign | 0.1227 | benign | -1.466 | Destabilizing | 0.122 | N | 0.283 | neutral | N | 0.499289699 | None | None | N |
L/K | 0.9865 | likely_pathogenic | 0.9834 | pathogenic | -2.459 | Highly Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
L/M | 0.2602 | likely_benign | 0.3036 | benign | -1.464 | Destabilizing | 0.996 | D | 0.751 | deleterious | None | None | None | None | N |
L/N | 0.991 | likely_pathogenic | 0.9884 | pathogenic | -2.839 | Highly Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
L/P | 0.9928 | likely_pathogenic | 0.9934 | pathogenic | -1.97 | Destabilizing | 0.998 | D | 0.841 | deleterious | N | 0.507897754 | None | None | N |
L/Q | 0.958 | likely_pathogenic | 0.9552 | pathogenic | -2.707 | Highly Destabilizing | 0.999 | D | 0.832 | deleterious | None | None | None | None | N |
L/R | 0.9673 | likely_pathogenic | 0.9657 | pathogenic | -2.048 | Highly Destabilizing | 0.998 | D | 0.813 | deleterious | N | 0.507897754 | None | None | N |
L/S | 0.9643 | likely_pathogenic | 0.9682 | pathogenic | -3.468 | Highly Destabilizing | 0.996 | D | 0.805 | deleterious | None | None | None | None | N |
L/T | 0.8894 | likely_pathogenic | 0.8914 | pathogenic | -3.114 | Highly Destabilizing | 0.97 | D | 0.764 | deleterious | None | None | None | None | N |
L/V | 0.1482 | likely_benign | 0.1762 | benign | -1.97 | Destabilizing | 0.248 | N | 0.336 | neutral | N | 0.493653518 | None | None | N |
L/W | 0.9109 | likely_pathogenic | 0.9322 | pathogenic | -2.17 | Highly Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
L/Y | 0.9147 | likely_pathogenic | 0.9296 | pathogenic | -1.984 | Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.