Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15640 | 47143;47144;47145 | chr2:178618632;178618631;178618630 | chr2:179483359;179483358;179483357 |
N2AB | 13999 | 42220;42221;42222 | chr2:178618632;178618631;178618630 | chr2:179483359;179483358;179483357 |
N2A | 13072 | 39439;39440;39441 | chr2:178618632;178618631;178618630 | chr2:179483359;179483358;179483357 |
N2B | 6575 | 19948;19949;19950 | chr2:178618632;178618631;178618630 | chr2:179483359;179483358;179483357 |
Novex-1 | 6700 | 20323;20324;20325 | chr2:178618632;178618631;178618630 | chr2:179483359;179483358;179483357 |
Novex-2 | 6767 | 20524;20525;20526 | chr2:178618632;178618631;178618630 | chr2:179483359;179483358;179483357 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.006 | N | 0.13 | 0.2 | 0.20549828249 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2189 | likely_benign | 0.2634 | benign | -0.49 | Destabilizing | 0.495 | N | 0.463 | neutral | None | None | None | None | I |
Q/C | 0.4084 | ambiguous | 0.5428 | ambiguous | -0.009 | Destabilizing | 0.995 | D | 0.553 | neutral | None | None | None | None | I |
Q/D | 0.4538 | ambiguous | 0.5452 | ambiguous | -1.021 | Destabilizing | 0.704 | D | 0.349 | neutral | None | None | None | None | I |
Q/E | 0.0995 | likely_benign | 0.1161 | benign | -0.941 | Destabilizing | 0.27 | N | 0.339 | neutral | N | 0.49103694 | None | None | I |
Q/F | 0.53 | ambiguous | 0.62 | pathogenic | -0.268 | Destabilizing | 0.944 | D | 0.569 | neutral | None | None | None | None | I |
Q/G | 0.2697 | likely_benign | 0.3298 | benign | -0.833 | Destabilizing | 0.704 | D | 0.531 | neutral | None | None | None | None | I |
Q/H | 0.141 | likely_benign | 0.1733 | benign | -0.842 | Destabilizing | 0.006 | N | 0.235 | neutral | N | 0.458047838 | None | None | I |
Q/I | 0.3213 | likely_benign | 0.3803 | ambiguous | 0.375 | Stabilizing | 0.944 | D | 0.578 | neutral | None | None | None | None | I |
Q/K | 0.0851 | likely_benign | 0.0879 | benign | -0.384 | Destabilizing | 0.002 | N | 0.152 | neutral | N | 0.436633482 | None | None | I |
Q/L | 0.1386 | likely_benign | 0.1872 | benign | 0.375 | Stabilizing | 0.642 | D | 0.535 | neutral | N | 0.493310231 | None | None | I |
Q/M | 0.3359 | likely_benign | 0.4087 | ambiguous | 0.862 | Stabilizing | 0.981 | D | 0.495 | neutral | None | None | None | None | I |
Q/N | 0.2653 | likely_benign | 0.3048 | benign | -0.895 | Destabilizing | 0.704 | D | 0.346 | neutral | None | None | None | None | I |
Q/P | 0.7771 | likely_pathogenic | 0.831 | pathogenic | 0.118 | Stabilizing | 0.784 | D | 0.519 | neutral | N | 0.496040309 | None | None | I |
Q/R | 0.0811 | likely_benign | 0.0884 | benign | -0.297 | Destabilizing | 0.006 | N | 0.13 | neutral | N | 0.433117574 | None | None | I |
Q/S | 0.2184 | likely_benign | 0.2434 | benign | -0.928 | Destabilizing | 0.495 | N | 0.381 | neutral | None | None | None | None | I |
Q/T | 0.1575 | likely_benign | 0.1755 | benign | -0.67 | Destabilizing | 0.704 | D | 0.495 | neutral | None | None | None | None | I |
Q/V | 0.2205 | likely_benign | 0.2642 | benign | 0.118 | Stabilizing | 0.828 | D | 0.575 | neutral | None | None | None | None | I |
Q/W | 0.3618 | ambiguous | 0.4752 | ambiguous | -0.198 | Destabilizing | 0.995 | D | 0.545 | neutral | None | None | None | None | I |
Q/Y | 0.3404 | ambiguous | 0.4308 | ambiguous | 0.063 | Stabilizing | 0.893 | D | 0.515 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.