Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15642 | 47149;47150;47151 | chr2:178618626;178618625;178618624 | chr2:179483353;179483352;179483351 |
N2AB | 14001 | 42226;42227;42228 | chr2:178618626;178618625;178618624 | chr2:179483353;179483352;179483351 |
N2A | 13074 | 39445;39446;39447 | chr2:178618626;178618625;178618624 | chr2:179483353;179483352;179483351 |
N2B | 6577 | 19954;19955;19956 | chr2:178618626;178618625;178618624 | chr2:179483353;179483352;179483351 |
Novex-1 | 6702 | 20329;20330;20331 | chr2:178618626;178618625;178618624 | chr2:179483353;179483352;179483351 |
Novex-2 | 6769 | 20530;20531;20532 | chr2:178618626;178618625;178618624 | chr2:179483353;179483352;179483351 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.733 | N | 0.453 | 0.305 | 0.339074221408 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2937 | likely_benign | 0.3756 | ambiguous | 0.051 | Stabilizing | 0.992 | D | 0.457 | neutral | None | None | None | None | I |
K/C | 0.6958 | likely_pathogenic | 0.8194 | pathogenic | -0.091 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
K/D | 0.5206 | ambiguous | 0.5974 | pathogenic | -0.133 | Destabilizing | 0.999 | D | 0.459 | neutral | None | None | None | None | I |
K/E | 0.1718 | likely_benign | 0.2085 | benign | -0.125 | Destabilizing | 0.989 | D | 0.47 | neutral | N | 0.502799491 | None | None | I |
K/F | 0.753 | likely_pathogenic | 0.8535 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.608 | neutral | None | None | None | None | I |
K/G | 0.4503 | ambiguous | 0.5577 | ambiguous | -0.14 | Destabilizing | 0.996 | D | 0.433 | neutral | None | None | None | None | I |
K/H | 0.3586 | ambiguous | 0.4455 | ambiguous | -0.399 | Destabilizing | 1.0 | D | 0.489 | neutral | None | None | None | None | I |
K/I | 0.2466 | likely_benign | 0.3213 | benign | 0.48 | Stabilizing | 0.997 | D | 0.595 | neutral | N | 0.513133294 | None | None | I |
K/L | 0.3501 | ambiguous | 0.4623 | ambiguous | 0.48 | Stabilizing | 0.992 | D | 0.426 | neutral | None | None | None | None | I |
K/M | 0.2589 | likely_benign | 0.3481 | ambiguous | 0.15 | Stabilizing | 1.0 | D | 0.497 | neutral | None | None | None | None | I |
K/N | 0.3853 | ambiguous | 0.4756 | ambiguous | 0.291 | Stabilizing | 0.998 | D | 0.461 | neutral | N | 0.512114899 | None | None | I |
K/P | 0.4954 | ambiguous | 0.5208 | ambiguous | 0.364 | Stabilizing | 1.0 | D | 0.49 | neutral | None | None | None | None | I |
K/Q | 0.1411 | likely_benign | 0.1722 | benign | 0.15 | Stabilizing | 0.998 | D | 0.495 | neutral | N | 0.511265133 | None | None | I |
K/R | 0.0877 | likely_benign | 0.1002 | benign | -0.016 | Destabilizing | 0.733 | D | 0.485 | neutral | N | 0.510637139 | None | None | I |
K/S | 0.3565 | ambiguous | 0.461 | ambiguous | -0.091 | Destabilizing | 0.983 | D | 0.458 | neutral | None | None | None | None | I |
K/T | 0.1601 | likely_benign | 0.2049 | benign | 0.056 | Stabilizing | 0.733 | D | 0.453 | neutral | N | 0.511777351 | None | None | I |
K/V | 0.2701 | likely_benign | 0.347 | ambiguous | 0.364 | Stabilizing | 0.998 | D | 0.434 | neutral | None | None | None | None | I |
K/W | 0.775 | likely_pathogenic | 0.8681 | pathogenic | -0.235 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
K/Y | 0.6436 | likely_pathogenic | 0.7647 | pathogenic | 0.114 | Stabilizing | 1.0 | D | 0.563 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.