Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15645 | 47158;47159;47160 | chr2:178618617;178618616;178618615 | chr2:179483344;179483343;179483342 |
N2AB | 14004 | 42235;42236;42237 | chr2:178618617;178618616;178618615 | chr2:179483344;179483343;179483342 |
N2A | 13077 | 39454;39455;39456 | chr2:178618617;178618616;178618615 | chr2:179483344;179483343;179483342 |
N2B | 6580 | 19963;19964;19965 | chr2:178618617;178618616;178618615 | chr2:179483344;179483343;179483342 |
Novex-1 | 6705 | 20338;20339;20340 | chr2:178618617;178618616;178618615 | chr2:179483344;179483343;179483342 |
Novex-2 | 6772 | 20539;20540;20541 | chr2:178618617;178618616;178618615 | chr2:179483344;179483343;179483342 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs2057766757 | None | 0.669 | N | 0.401 | 0.177 | 0.411133732114 | gnomAD-4.0.0 | 3.34922E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.83301E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2374 | likely_benign | 0.3368 | benign | -0.297 | Destabilizing | 0.688 | D | 0.465 | neutral | None | None | None | None | I |
K/C | 0.5444 | ambiguous | 0.6757 | pathogenic | -0.482 | Destabilizing | 0.998 | D | 0.558 | neutral | None | None | None | None | I |
K/D | 0.4903 | ambiguous | 0.588 | pathogenic | -0.019 | Destabilizing | 0.728 | D | 0.45 | neutral | None | None | None | None | I |
K/E | 0.126 | likely_benign | 0.1781 | benign | 0.041 | Stabilizing | 0.022 | N | 0.189 | neutral | N | 0.47235402 | None | None | I |
K/F | 0.5432 | ambiguous | 0.6581 | pathogenic | -0.135 | Destabilizing | 0.991 | D | 0.537 | neutral | None | None | None | None | I |
K/G | 0.3817 | ambiguous | 0.4967 | ambiguous | -0.601 | Destabilizing | 0.016 | N | 0.304 | neutral | None | None | None | None | I |
K/H | 0.2353 | likely_benign | 0.3022 | benign | -0.874 | Destabilizing | 0.974 | D | 0.508 | neutral | None | None | None | None | I |
K/I | 0.2085 | likely_benign | 0.2907 | benign | 0.456 | Stabilizing | 0.966 | D | 0.537 | neutral | N | 0.515046642 | None | None | I |
K/L | 0.231 | likely_benign | 0.3496 | ambiguous | 0.456 | Stabilizing | 0.842 | D | 0.541 | neutral | None | None | None | None | I |
K/M | 0.1397 | likely_benign | 0.1985 | benign | 0.234 | Stabilizing | 0.993 | D | 0.507 | neutral | None | None | None | None | I |
K/N | 0.2814 | likely_benign | 0.3556 | ambiguous | -0.217 | Destabilizing | 0.801 | D | 0.417 | neutral | N | 0.513558625 | None | None | I |
K/P | 0.8068 | likely_pathogenic | 0.8906 | pathogenic | 0.236 | Stabilizing | 0.974 | D | 0.479 | neutral | None | None | None | None | I |
K/Q | 0.0991 | likely_benign | 0.1299 | benign | -0.361 | Destabilizing | 0.051 | N | 0.25 | neutral | N | 0.480734311 | None | None | I |
K/R | 0.0788 | likely_benign | 0.0906 | benign | -0.429 | Destabilizing | 0.669 | D | 0.401 | neutral | N | 0.512787391 | None | None | I |
K/S | 0.2596 | likely_benign | 0.3529 | ambiguous | -0.811 | Destabilizing | 0.688 | D | 0.365 | neutral | None | None | None | None | I |
K/T | 0.1057 | likely_benign | 0.1447 | benign | -0.573 | Destabilizing | 0.801 | D | 0.509 | neutral | N | 0.49946633 | None | None | I |
K/V | 0.1905 | likely_benign | 0.2767 | benign | 0.236 | Stabilizing | 0.915 | D | 0.509 | neutral | None | None | None | None | I |
K/W | 0.6268 | likely_pathogenic | 0.7441 | pathogenic | -0.032 | Destabilizing | 0.998 | D | 0.571 | neutral | None | None | None | None | I |
K/Y | 0.4587 | ambiguous | 0.5635 | ambiguous | 0.255 | Stabilizing | 0.991 | D | 0.535 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.