Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15646 | 47161;47162;47163 | chr2:178618614;178618613;178618612 | chr2:179483341;179483340;179483339 |
N2AB | 14005 | 42238;42239;42240 | chr2:178618614;178618613;178618612 | chr2:179483341;179483340;179483339 |
N2A | 13078 | 39457;39458;39459 | chr2:178618614;178618613;178618612 | chr2:179483341;179483340;179483339 |
N2B | 6581 | 19966;19967;19968 | chr2:178618614;178618613;178618612 | chr2:179483341;179483340;179483339 |
Novex-1 | 6706 | 20341;20342;20343 | chr2:178618614;178618613;178618612 | chr2:179483341;179483340;179483339 |
Novex-2 | 6773 | 20542;20543;20544 | chr2:178618614;178618613;178618612 | chr2:179483341;179483340;179483339 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.989 | N | 0.655 | 0.423 | 0.405422107966 | gnomAD-4.0.0 | 8.40225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6389 | likely_pathogenic | 0.6819 | pathogenic | -0.946 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
A/D | 0.3427 | ambiguous | 0.4134 | ambiguous | -1.38 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
A/E | 0.3883 | ambiguous | 0.4468 | ambiguous | -1.404 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | N | 0.512415964 | None | None | N |
A/F | 0.5916 | likely_pathogenic | 0.6358 | pathogenic | -0.919 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | N |
A/G | 0.1335 | likely_benign | 0.1527 | benign | -1.169 | Destabilizing | 0.054 | N | 0.341 | neutral | N | 0.503141477 | None | None | N |
A/H | 0.6999 | likely_pathogenic | 0.7452 | pathogenic | -1.308 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
A/I | 0.428 | ambiguous | 0.4799 | ambiguous | -0.358 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
A/K | 0.6427 | likely_pathogenic | 0.6835 | pathogenic | -1.444 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
A/L | 0.3744 | ambiguous | 0.4209 | ambiguous | -0.358 | Destabilizing | 0.992 | D | 0.697 | prob.neutral | None | None | None | None | N |
A/M | 0.3685 | ambiguous | 0.4435 | ambiguous | -0.345 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
A/N | 0.427 | ambiguous | 0.4875 | ambiguous | -1.18 | Destabilizing | 0.998 | D | 0.722 | prob.delet. | None | None | None | None | N |
A/P | 0.9768 | likely_pathogenic | 0.977 | pathogenic | -0.501 | Destabilizing | 0.999 | D | 0.744 | deleterious | N | 0.517863078 | None | None | N |
A/Q | 0.4945 | ambiguous | 0.5221 | ambiguous | -1.33 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
A/R | 0.6303 | likely_pathogenic | 0.6605 | pathogenic | -1.029 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
A/S | 0.1135 | likely_benign | 0.1294 | benign | -1.483 | Destabilizing | 0.978 | D | 0.547 | neutral | N | 0.513844628 | None | None | N |
A/T | 0.1099 | likely_benign | 0.1233 | benign | -1.419 | Destabilizing | 0.989 | D | 0.655 | neutral | N | 0.515931204 | None | None | N |
A/V | 0.196 | likely_benign | 0.2283 | benign | -0.501 | Destabilizing | 0.996 | D | 0.637 | neutral | N | 0.509293798 | None | None | N |
A/W | 0.9093 | likely_pathogenic | 0.9302 | pathogenic | -1.286 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
A/Y | 0.7066 | likely_pathogenic | 0.748 | pathogenic | -0.897 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.