Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15647 | 47164;47165;47166 | chr2:178618611;178618610;178618609 | chr2:179483338;179483337;179483336 |
N2AB | 14006 | 42241;42242;42243 | chr2:178618611;178618610;178618609 | chr2:179483338;179483337;179483336 |
N2A | 13079 | 39460;39461;39462 | chr2:178618611;178618610;178618609 | chr2:179483338;179483337;179483336 |
N2B | 6582 | 19969;19970;19971 | chr2:178618611;178618610;178618609 | chr2:179483338;179483337;179483336 |
Novex-1 | 6707 | 20344;20345;20346 | chr2:178618611;178618610;178618609 | chr2:179483338;179483337;179483336 |
Novex-2 | 6774 | 20545;20546;20547 | chr2:178618611;178618610;178618609 | chr2:179483338;179483337;179483336 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | rs749085231 | 0.758 | 1.0 | N | 0.853 | 0.659 | 0.640954352468 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/V | rs749085231 | 0.758 | 1.0 | N | 0.853 | 0.659 | 0.640954352468 | gnomAD-4.0.0 | 1.5949E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86374E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1955 | likely_benign | 0.254 | benign | -0.566 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | N | 0.517121857 | None | None | N |
E/C | 0.8839 | likely_pathogenic | 0.928 | pathogenic | -0.451 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
E/D | 0.2146 | likely_benign | 0.2769 | benign | -0.86 | Destabilizing | 0.999 | D | 0.485 | neutral | N | 0.518417153 | None | None | N |
E/F | 0.8068 | likely_pathogenic | 0.8686 | pathogenic | 0.213 | Stabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
E/G | 0.3205 | likely_benign | 0.397 | ambiguous | -0.918 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.519864475 | None | None | N |
E/H | 0.5369 | ambiguous | 0.6337 | pathogenic | 0.259 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/I | 0.4199 | ambiguous | 0.5294 | ambiguous | 0.39 | Stabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
E/K | 0.2165 | likely_benign | 0.2641 | benign | -0.26 | Destabilizing | 0.999 | D | 0.584 | neutral | N | 0.51446667 | None | None | N |
E/L | 0.5509 | ambiguous | 0.6984 | pathogenic | 0.39 | Stabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
E/M | 0.538 | ambiguous | 0.6402 | pathogenic | 0.531 | Stabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
E/N | 0.3487 | ambiguous | 0.4351 | ambiguous | -0.951 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
E/P | 0.9385 | likely_pathogenic | 0.9607 | pathogenic | 0.093 | Stabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
E/Q | 0.1721 | likely_benign | 0.2059 | benign | -0.788 | Destabilizing | 1.0 | D | 0.64 | neutral | N | 0.516465873 | None | None | N |
E/R | 0.3764 | ambiguous | 0.4439 | ambiguous | 0.16 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/S | 0.2097 | likely_benign | 0.2576 | benign | -1.177 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
E/T | 0.2008 | likely_benign | 0.2528 | benign | -0.871 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
E/V | 0.2327 | likely_benign | 0.3101 | benign | 0.093 | Stabilizing | 1.0 | D | 0.853 | deleterious | N | 0.519864475 | None | None | N |
E/W | 0.9254 | likely_pathogenic | 0.9536 | pathogenic | 0.517 | Stabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
E/Y | 0.7376 | likely_pathogenic | 0.8197 | pathogenic | 0.49 | Stabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.